mlsanityData to 14 Oct 2026

A Unified Uncertainty Representation for Graph Neural Networks via Doubly-Spectral Stochastic Expansion

arXiv 2609.35703 ↗First posted 28 Sep 2026cs.LG cs.AIcited by 0

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Abstract (arXiv)

Reliable deployment of graph neural networks requires calibration, out-of-distribution (OOD) detection, and robustness to distribution shift, yet existing methods address these needs with separate models and objectives. We model uncertain node embeddings as random graph signals: graph Fourier filters capture structural variation, and a scalar orthogonal-polynomial chaos coordinate captures latent stochastic variation. The resulting doubly-spectral stochastic (DSS) expansion supplies task-matched readouts from one representation: the mean coefficient encodes class evidence for the energy-based OOD score, the higher-order coefficients encode structured logit variation, and quadrature averaging over the chaos coordinate defines the single predictive distribution used for prediction and calibration. A capacity theorem shows that, under a full-rank feature assumption, a restricted subfamily matches the chaos coefficients of any Gaussian-latent random graph signal, with exponentially decaying truncation error under a growth condition; the task-level claims are established empirically. DSS-GNN has two deployment modes: standalone, or as a residual branch beside a deterministic encoder (DSS-Hybrid). Standalone DSS-GNN achieves the lowest Brier score among the compared uncertainty-aware baselines on all 14 node classification benchmarks without post-hoc correction; DSS-Hybrid achieves the best AUROC on most node-OOD settings, competitive cross-graph OOD detection, and the strongest shifted accuracy on all 7 GOOD concept-shift benchmarks under standard empirical risk minimization (ERM). Cross-evaluating both modes on all three tasks shows that each remains effective on the other's tasks, with documented exceptions, and yields explicit deployment guidance.

Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 23 of its 38 references that are in the map. First posted on arXiv 28 Sep 2026.

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References · 23

  1. 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,361
  2. 2017Graph Attention Networkscited by 8,923
  3. 2015Dropout as a Bayesian Approximation: Representing Model Uncertainty in Deep Learningcited by 4,448
  4. 2016Simple and Scalable Predictive Uncertainty Estimation using Deep Ensemblescited by 3,926
  5. 2016Convolutional Neural Networks on Graphs with Fast Localized Spectral Filteringcited by 2,089
  6. 2019Invariant Risk Minimizationcited by 1,854
  7. 2020Energy-based Out-of-distribution Detectioncited by 1,299
  8. 2018Pitfalls of Graph Neural Network Evaluationcited by 1,007
  9. 2020Geom-GCN: Geometric Graph Convolutional Networkscited by 826
  10. 2020Out-of-Distribution Generalization via Risk Extrapolation (REx)cited by 742
  11. 2020Adaptive Universal Generalized PageRank Graph Neural Networkcited by 595
  12. 2017Graph Signal Processing: Overview, Challenges and Applicationscited by 413
11 more
  1. 2021Beyond Low-frequency Information in Graph Convolutional Networkscited by 362
  2. 2023A critical look at the evaluation of GNNs under heterophily: Are we really making progress?cited by 343
  3. 2020Enhancing Graph Neural Network-based Fraud Detectors against Camouflaged Fraudsterscited by 250
  4. 2021BernNet: Learning Arbitrary Graph Spectral Filters via Bernstein Approximationcited by 195
  5. 2022GOOD: A Graph Out-of-Distribution Benchmarkcited by 141
  6. 2021Graph Posterior Network: Bayesian Predictive Uncertainty for Node Classificationcited by 80
  7. 2023Energy-based Out-of-Distribution Detection for Graph Neural Networkscited by 68
  8. 2024Energy-based Epistemic Uncertainty for Graph Neural Networkscited by 14
  9. 2024Accurate and Scalable Estimation of Epistemic Uncertainty for Graph Neural Networkscited by 8
  10. 2023The Deep Arbitrary Polynomial Chaos Neural Network or how Deep Artificial Neural Networks could benefit from Data-Driven Homogeneous Chaos Theorycited by 3
  11. 2024Topology-Aware Dynamic Reweighting for Distribution Shifts on Graphcited by 3

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