Less Annotation, More Interpretation: Prior-Guided Concept Bottleneck Models for Interpretable Cancer Imaging Diagnosis
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Abstract (arXiv)
Concept bottleneck models (CBMs) can improve the transparency of cancer image diagnostic prediction by expressing predictions through radiological concepts. However, their dependence on instance-level concept annotations limits practical applicability. We propose a prior-guided hybrid CBM that integrates limited concept annotations, class-conditional concept distribution matching on unannotated patients, and prior initialization of the concept-to-diagnosis head. We evaluate the method on CBIS-DDSM mammographic masses and calcifications and LIDC-IDRI pulmonary nodules across 0-100% concept annotation. In the clinically relevant 0-20% annotation regime, the hybrid CBM consistently improves mean concept AUC over a matched standard CBM, while maintaining diagnostic performance close to black-box models. At 10% annotation specifically, concept AUC increases from 0.619 to 0.741 for masses, from 0.650 to 0.787 for calcifications, and from 0.597 to 0.642 for pulmonary nodules. Ablation experiments identify prior initialization as the main component contributing to improved concept detection, likely by stabilizing the concept-to-diagnosis head. Zero-shot VLMs remain insufficient for reliable fine-grained tumor-level concept prediction. These findings suggest that structured priors can substantially reduce the annotation burden of interpretable cancer imaging models.
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References · 13
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- 2016Densely Connected Convolutional Networkscited by 6,720
- 2017Axiomatic Attribution for Deep Networkscited by 3,384
- 2020Concept Bottleneck Modelscited by 1,032
- 2019Med3D: Transfer Learning for 3D Medical Image Analysiscited by 288
- 2023Label-Free Concept Bottleneck Modelscited by 285
- 2024Generalist Foundation Models from a Multimodal Dataset for 3D Computed Tomographycited by 199
- 2024Mammo-CLIP: A Vision Language Foundation Model to Enhance Data Efficiency and Robustness in Mammographycited by 38
- 2024Semi-supervised Concept Bottleneck Modelscited by 21
- 2025CBVLM: Training-free Explainable Concept-based Large Vision Language Models for Medical Image Classificationcited by 4
- 2025Weakly Supervised Concept Learning with Class-Level Priors for Interpretable Medical Diagnosiscited by 1
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- 2026Latent-CURE for Breast Cancer Diagnosis
- 2024AdaCBM: An Adaptive Concept Bottleneck Model for Explainable and Accurate Diagnosis
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