mlsanityData to 7 Oct 2026

Zero-Cost Virtual RNA: Approximating Immunotherapy Signatures via Cross-Modal WSI Retrieval

arXiv 2608.00544 ↗First posted 1 Aug 2026cs.CVcited by 0

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Abstract (arXiv)

Identifying the ``Inflamed'' immunophenotype in Gastric Adenocarcinoma predicts immunotherapy response but requires an expensive 10-gene RNA signature. While deep learning on standard H&E slides offers a scalable alternative, conventional binary classifiers oversimplify continuous RNA data and introduce label noise. To resolve this, we propose VITA (VIrtual Transcriptomic Approximation). By aligning H&E and RNA into a joint latent space during training, VITA requires only standard H&E at inference to retrieve morphologically similar historical cases and approximate the continuous RNA signature. Achieving 0.72 classification accuracy and a 0.66 Spearman correlation, VITA provides a cost-effective ``virtual transcriptomics'' pre-screening tool that preserves the continuous phenotypic spectrum without requiring genomic sequencing.

Key facts. No citing papers in the map yet (data through 7 Oct 2026). Builds on 2 of its 8 references that are in the map. First posted on arXiv 1 Aug 2026.

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References · 2

  1. 2020Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Imagescited by 738
  2. 2017Self-Normalizing Neural Networkscited by 591

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