mlsanityData to 14 Oct 2026

Harmonized Interpretable ECG Waveform Features for Robust Cross-Dataset Clinical Prediction

arXiv 2607.23412 ↗First posted 26 Jul 2026cs.LGcited by 0

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Abstract (arXiv)

Electrocardiograms (ECGs) are widely used for cardiovascular risk prediction, yet models often fail to transfer across hospitals because of protocol, population, and measurement differences. We benchmark cross-dataset generalization on three tasks - heart failure classification, 30-day all-cause mortality, and 30-day mortality among sinus-rhythm ECGs - using two large cohorts (MIMIC-IV and the Alberta Cohort). To reduce vendor-specific measurement mismatch, we build a harmonized, interpretable feature representation computed directly from raw waveforms: FeatureDB morphology/heart-rate-variability summaries plus compact time-frequency descriptors (autoregressive and wavelet features). We train XGBoost models on this unified feature space and evaluate with patient-disjoint internal and bidirectional external testing. We pre-specify two hypotheses: (H1) external AUROC retains at least 90% of source-site internal AUROC under transfer, and (H2) internal AUROC of the harmonized feature set stays within 10% of dataset-native machine-measurement models. Across tasks, internal AUROC is 0.79-0.82 and cross-dataset AUROC is 0.74-0.78, with larger and direction-dependent AUPRC shifts under transfer. As an exploratory benchmark, an end-to-end ConvNeXt model trained directly on raw ECG waveforms with age and sex achieves higher internal AUROC, while the harmonized representation remains competitive in relative cross-dataset transfer stability. These findings show that a consistent waveform-derived feature interface preserves performance, supports realistic external validation, and provides a transparent alternative for cross-site clinical prediction.

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References · 6

  1. 2017A Unified Approach to Interpreting Model Predictionscited by 6,555
  2. 2016XGBoost: A Scalable Tree Boosting Systemcited by 5,166
  3. 2019Optuna: A Next-generation Hyperparameter Optimization Frameworkcited by 2,501
  4. 2023ConvNeXt V2: Co-designing and Scaling ConvNets with Masked Autoencoderscited by 712
  5. 2019Automatic diagnosis of the 12-lead ECG using a deep neural networkcited by 164
  6. 2024Empirical investigation of multi-source cross-validation in clinical ECG classificationcited by 2

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