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NoLimits.jl: Flexible and Composable Nonlinear Mixed-Effects Modeling in Julia

arXiv 2606.24427 ↗First posted 23 Jun 2026stat.CO stat.MLcited by 0

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Abstract (arXiv)

Nonlinear mixed-effects models are widely used to analyze longitudinal data, but existing open-source software often supports only a limited subset of the model structures, inference methods, machine-learning components, automatic differentiation techniques, and random-effects distributions required in modern applications. We introduce NoLimits.jl, an open-source Julia package for flexible and composable nonlinear mixed-effects modeling. Its macro-based modeling language enables observation and latent-state models to be constructed from diverse building blocks, including ordinary differential equations, Markov models, and neural networks. NoLimits.jl supports flexible, covariate-dependent observation and random-effects distributions and provides a unified interface to frequentist inference through Laplace approximation, stochastic expectation maximization, and Bayesian Markov chain Monte Carlo methods. We demonstrate the package on three case studies showcasing its workflows, integration of differentiable machine-learning components, and data-driven estimation of random-effects distributions using normalizing flows. Together, these capabilities substantially expand the range of nonlinear mixed-effects models that can be specified, estimated, and compared within a single open-source framework.

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References · 3

  1. 2020Universal Differential Equations for Scientific Machine Learningcited by 353
  2. 2026Extending the saemix package for R to fit non Gaussian outcomescited by 1
  3. 2026Fitting Large Nonlinear Mixed Effects Models Using Variational Expectation Maximizationcited by 1

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