mlsanityData to 14 Oct 2026

SC3: The Multi-Solvent Solubility Challenge and Benchmark

arXiv 2606.07656 ↗First posted 3 Jun 2026physics.chem-ph cs.CE cs.LGcited by 0

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Abstract (arXiv)

Solubility prediction is a standard benchmark in computational chemistry, yet multi-solvent models which reportedly approach the experimental-noise ceiling (i.e. the aleatoric limit) are not yet reliable enough to be deployed. We argue that this gap is partly artefactual: published benchmarks differ in curation policies, evaluate on count-weighted RMSE that hides failure on tail-heavy solvent distributions, and treat the widely cited 0.6-0.8 log S inter-laboratory figure as the aleatoric ceiling even though it reflects worst-case, not expected, disagreement. We introduce SC3, a multi-solvent solubility benchmark built on BigSolDB v2.1 with three contributions: (i) a reproducible curation pipeline yielding 101,535 measurements over 1,327 solutes and 206 solvents, with a recalibrated aleatoric floor of 0.106 log S-roughly 6 times tighter than the conventional figure; (ii) nested Gold/Silver/Bronze consensus tiers with per-point standard deviation, three leakage-checked splits, and a multi-solvent metric suite (PS-RMSE, Z-RMSE); and (iii) a 31-model benchmark across six families, whose best Bronze PS-RMSE sits at 5 times the aleatoric limit, and we observe this is a gap unclosed by any deep alternative tested. We perform three follow-on analyses: data scaling, transfer from quantum-chemistry solvation energies, and feature-level attribution, which demonstrates that calibrated per-point uncertainty is a reusable infrastructure for diagnosis beyond point prediction.

Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 10 of its 44 references that are in the map. First posted on arXiv 3 Jun 2026.

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References · 10

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  7. 2024Uni-Mol2: Exploring Molecular Pretraining Model at Scalecited by 20
  8. 2024ChemFM as a Scaling Law Guided Foundation Model Pre-trained on Informative Chemicalscited by 10
  9. 2024Generalizable, Fast, and Accurate DeepQSPR with fastpropcited by 4
  10. 2025Solvaformer: an SE(3)-equivariant graph transformer for small molecule solubility predictioncited by 2

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