DaX: Learning General Pathology Representations Across Scales
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Abstract (arXiv)
Computational pathology requires visual representations that transfer across diverse clinical endpoints and remain robust to variation in magnification, staining, scanner type, slide preparation, and input resolution. We present DaX, a pathology vision foundation model that adapts DINOv3-style self-supervised learning to whole-slide histopathology. DaX is initialized from natural-image DINOv3 weights and incorporates continuous magnification training, cross-scale tissue views, orientation-agnostic and acquisition-robust augmentation, multi-input-size training, and Gram-anchored dense consistency. These designs aim to connect local cellular morphology with global tissue architecture while stabilizing dense token-level representations across input scales. We further construct a WSI-level benchmark comprising 161 clinically meaningful tasks from 44 public datasets, covering 28,182 patients and 34,394 slides across four clinical domains and nine task categories. All models are evaluated under a fixed patient-level cross-validation protocol with fold-level statistical ranking, enabling reproducible comparisons that are less sensitive to split-dependent variation. Across this benchmark, DaX achieves the highest mean performance across tasks and consistently strong task-level ranking scores, with gains spanning diagnostic pathology, biomarker and molecular profiling, tissue/specimen context, and risk, response, and prognosis. These results support DaX as a transferable visual encoder for computational pathology and provide a standardized evaluation framework for future pathology foundation models. Project page: https://alibaba-damo-academy.github.io/DaX/benchboard/.
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References · 11
- 2023DINOv2: Learning Robust Visual Features without Supervisioncited by 7,974
- 2025DINOv3cited by 1,414
- 2024Virchow2: Scaling Self-Supervised Mixed Magnification Models in Pathologycited by 161
- 2024Phikon-v2, A large and public feature extractor for biomarker predictioncited by 74
- 2024Hibou: A Family of Foundational Vision Transformers for Pathologycited by 57
- 2024Towards Large-Scale Training of Pathology Foundation Modelscited by 23
- 2025A Survey of Pathology Foundation Model: Progress and Future Directionscited by 16
- 2025HISTAI: An Open-Source, Large-Scale Whole Slide Image Dataset for Computational Pathologycited by 14
- 2025Towards Robust Foundation Models for Digital Pathologycited by 2
- 2025EXAONE Path 2.5: Pathology Foundation Model with Multi-Omics Alignmentcited by 2
- 2026Mind the Gap: Continuous Magnification Sampling for Pathology Foundation Modelscited by 1
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