mlsanityData to 14 Oct 2026

Learning Causal Orderings for In-Context Tabular Prediction

arXiv 2605.22335 ↗First posted 21 May 2026cs.LGcited by 1

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Abstract (arXiv)

In-context learning for tabular data sets strong predictive standards in observational settings; it however primarily relies on correlational structure, which becomes unreliable under distribution shift or intervention. While established methods to discover causal structure exist, they are often focused on structure identifiability and decoupled from the predictive architectures that could benefit from them. To bridge these perspectives, we study how to simultaneously infer and enforce causal structure in the form of topological variable orderings into tabular prediction. Unlike standard architectures, our model TabOrder uses causal order-constrained attention, basing predictions only on features that precede a target under a learned causal order. Similar to causal discovery methods, TabOrder learns the optimal variable ordering in an unsupervised manner through a likelihood-based objective. We justify this choice under standard functional model classes and also study how sample missingness, a common challenge in tabular data, interacts with causal direction identification. Empirically, we confirm that TabOrder recovers accurate variable orderings while addressing prediction and imputation tasks, as well as gives insight into real-world biological data under intervention.

Key facts. Cited by 1 paper in the map (data through 14 Oct 2026). Builds on 25 of its 43 references that are in the map. First posted on arXiv 21 May 2026.

Builds on

25 of 43 references.

References · 25

  1. 2017Attention Is All You Needcited by 60,361
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  4. 2022TabPFN: A Transformer That Solves Small Tabular Classification Problems in a Secondcited by 674
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  12. 2022Score matching enables causal discovery of nonlinear additive noise modelscited by 111
13 more
  1. 2014Matrix Completion and Low-Rank SVD via Fast Alternating Least Squarescited by 104
  2. 2022Amortized Inference for Causal Structure Learningcited by 90
  3. 2022HyperImpute: Generalized Iterative Imputation with Automatic Model Selectioncited by 83
  4. 2022Learning to Induce Causal Structurecited by 68
  5. 2021MIRACLE: Causally-Aware Imputation via Learning Missing Data Mechanismscited by 51
  6. 2025Do-PFN: In-Context Learning for Causal Effect Estimationcited by 51
  7. 2025CausalPFN: Amortized Causal Effect Estimation via In-Context Learningcited by 49
  8. 2023Scalable Causal Discovery with Score Matchingcited by 45
  9. 2023Causal Discovery with Score Matching on Additive Models with Arbitrary Noisecited by 43
  10. 2023A Scale-Invariant Sorting Criterion to Find a Causal Order in Additive Noise Modelscited by 28
  11. 2024Demystifying amortized causal discovery with transformerscited by 11
  12. 2024Not Another Imputation Method: A Transformer-based Model for Missing Values in Tabular Datasetscited by 10
  13. 2025Algorithmic causal structure emerging through compressioncited by 3

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