HiRes: Inspectable Precedent Memory for Reaction Condition Recommendation
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Abstract (arXiv)
Reaction condition recommendation sits immediately after retrosynthetic disconnection selection, and in practice, chemists require both accurate predictions and the precedents that justify them. We present HiRes (Hierarchical Reaction Representations), a retrieval-augmented condition recommendation system whose learned reaction space serves as both a classifier feature and an inspectable precedent memory. The model combines a graph encoder, transformation-aware cross-attention, multi-stream reaction fusion, and a k-NN retrieval layer. HiRes achieves state-of-the-art performance among primary-slot USPTO-Condition models, reaching Catalyst, Solvent, and Reagent top-1 accuracies (Acc@1) of 0.929, 0.534, and 0.530 respectively. It ties the best reported baseline on Catalyst while outperforming models such as REACON on Solvent and Reagent. Furthermore, paired bootstrap analysis demonstrates that integrating retrieval with learned condition heads provides statistically significant gains for solvent and reagent selection over purely parametric approaches. Ultimately, HiRes bridges the gap between predictive accuracy and chemical interpretability, offering a single representation that supplies both competitive recommendations and the concrete chemical precedents necessary for practical synthesis planning.
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References · 7
- 2020Retrieval-Augmented Generation for Knowledge-Intensive NLP Taskscited by 9,297
- 2017Billion-scale similarity search with GPUscited by 2,497
- 2021Improving language models by retrieving from trillions of tokenscited by 1,293
- 2021How Attentive are Graph Attention Networks?cited by 835
- 2019Generalization through Memorization: Nearest Neighbor Language Modelscited by 800
- 2019Analyzing Learned Molecular Representations for Property Predictioncited by 375
- 2018Molecular Transformer - A Model for Uncertainty-Calibrated Chemical Reaction Predictioncited by 229
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