Block-Wise Differentiable Sinkhorn Attention: Tail-Refinement Gradients with a Gap-Aware Dustbin Bridge
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Abstract (arXiv)
We study long-context balanced entropic optimal transport (OT) attention on TPU hardware through a stopped-base, fixed-depth tail-refinement surrogate. After a stopped T-step Sinkhorn solve, we unroll a short refinement tail and differentiate that surrogate exactly. For the reported R=2 TPU path, the backward pass contains four staircase plan factors. We prove an exact one-reference-tile schedule: the R=2 score cotangent is a single reference plan tile times an explicit modifier field built from vector cotangents and dual differences. This yields block-wise cost O((T+R)LW), O(Ld) input storage, and O(L) additional HBM usage for fixed head dimension d and band width W on the balanced fixed-support path. We also formalize the current textttdustbinblock path as the same unit-target surrogate on an augmented support, so the adjoint schedule lifts to the single-active-dustbin path used in our TPU runs; this bridge is algebraic and does not claim a general KL-unbalanced or arbitrary-capacity gap model. We provide a local surrogate-bias bound, an a posteriori bias certificate, and a projective contraction certificate for strictly positive active blocks. On synthetic masked problems, the optimized kernel matches exact autodiff of the same centered surrogate to within 10-5--10-10. On TPU v6e-8, a four-configuration Pfam screen completes end-to-end, and a promoted balanced R=2 run sustains roughly 8.5 examples per second through a three-hour budget, reaching step 1437. Held-out Pfam test shards improve reconstruction from 5.57 to 2.05 and sparse CE from 5.53 to 5.30 relative to step 0, with CE logged diagnostically rather than optimized directly; target-barycenter alignment metrics do not materially improve, and a deterministic diagonal reference remains stronger on those metrics.
Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 8 of its 18 references that are in the map. First posted on arXiv 28 Apr 2026.
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References · 8
- 2022FlashAttention: Fast and Memory-Efficient Exact Attention with IO-Awarenesscited by 3,673
- 2020Longformer: The Long-Document Transformercited by 3,413
- 2013Sinkhorn Distances: Lightspeed Computation of Optimal Transportation Distancescited by 2,316
- 2020Big Bird: Transformers for Longer Sequencescited by 1,684
- 2019Deep Equilibrium Modelscited by 615
- 2018Differential Properties of Sinkhorn Approximation for Learning with Wasserstein Distancecited by 56
- 2026FlashSinkhorn: IO-Aware Entropic Optimal Transport on GPUcited by 11
- 2022The derivatives of Sinkhorn-Knopp convergecited by 9
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