mlsanityData to 7 Oct 2026

How Creative Are Large Language Models in Generating Molecules?

arXiv 2604.18031 ↗First posted 20 Apr 2026cs.CL cs.LG q-bio.BMcited by 0

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Abstract (arXiv)

Molecule generation requires satisfying multiple chemical and biological constraints while searching a large and structured chemical space. This makes it a non-binary problem, where effective models must identify non-obvious solutions under constraints while maintaining exploration to improve success by escaping local optima. From this perspective, creativity is a functional requirement in molecular generation rather than an aesthetic notion. Large language models (LLMs) can generate molecular representations directly from natural language prompts, but it remains unclear what type of creativity they exhibit in this setting and how it should be evaluated. In this work, we study the creative behavior of LLMs in molecular generation through a systematic empirical evaluation across physicochemical, ADMET, and biological activity tasks. We characterize creativity along two complementary dimensions, convergent creativity and divergent creativity, and analyze how different factors shape these behaviors. Our results indicate that LLMs exhibit distinct patterns of creative behavior in molecule generation, such as an increase in constraint satisfaction when additional constraints are imposed. Overall, our work is the first to reframe the abilities required for molecule generation as creativity, providing a systematic understanding of creativity in LLM-based molecular generation and clarifying the appropriate use of LLMs in molecular discovery pipelines.

Key facts. No citing papers in the map yet (data through 7 Oct 2026). Builds on 26 of its 40 references that are in the map. First posted on arXiv 20 Apr 2026.

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References · 26

  1. 2024The Llama 3 Herd of Modelscited by 14,192
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  3. 2022Equivariant Diffusion for Molecule Generation in 3Dcited by 666
  4. 2018Junction Tree Variational Autoencoder for Molecular Graph Generationcited by 647
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  10. 2021Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Developmentcited by 258
  11. 2019Symmetry-adapted generation of 3d point sets for the targeted discovery of moleculescited by 171
  12. 2023Art or Artifice? Large Language Models and the False Promise of Creativitycited by 168
14 more
  1. 2022Sample Efficiency Matters: A Benchmark for Practical Molecular Optimizationcited by 151
  2. 2017Objective-Reinforced Generative Adversarial Networks (ORGAN) for Sequence Generation Modelscited by 116
  3. 2023Empowering Molecule Discovery for Molecule-Caption Translation with Large Language Models: A ChatGPT Perspectivecited by 91
  4. 2019MolecularRNN: Generating realistic molecular graphs with optimized propertiescited by 80
  5. 2024LLM Discussion: Enhancing the Creativity of Large Language Models via Discussion Framework and Role-Playcited by 65
  6. 2023Grammar Prompting for Domain-Specific Language Generation with Large Language Modelscited by 58
  7. 2024AI as Humanity's Salieri: Quantifying Linguistic Creativity of Language Models via Systematic Attribution of Machine Text against Web Textcited by 40
  8. 2024Benchmarking Language Model Creativity: A Case Study on Code Generationcited by 38
  9. 2023MacGyver: Are Large Language Models Creative Problem Solvers?cited by 33
  10. 2024CS4: Measuring the Creativity of Large Language Models Automatically by Controlling the Number of Story-Writing Constraintscited by 22
  11. 2024CreativEval: Evaluating Creativity of LLM-Based Hardware Code Generationcited by 19
  12. 2024Control Large Language Models via Divide and Conquercited by 5
  13. 2025How to Make Large Language Models Generate 100% Valid Molecules?cited by 4
  14. 2024Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Modelcited by 2

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