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Cell-induced densification and tether formation in fibrous extracellular matrices with biomimetic physics-informed neural networks

arXiv 2603.29184 ↗First posted 31 Mar 2026cs.LG cs.NA math.NAcited by 0

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Abstract (arXiv)

Nonconvex multi-well energies in cell-induced phase transitions give rise to fine-scale microstructures, low-regularity transition layers and sharp interfaces, all of which pose numerical challenges for physics-informed learning. Here we introduce biomimetic physics-informed neural networks (Bio-PINNs), which implement a near-to-far curriculum by progressively revealing the computational domain away from the cell boundary and combining this schedule with a deformation-uncertainty proxy that concentrates collocation points near evolving transition layers and tether-forming regions. Across single-cell and multicellular benchmarks, Bio-PINNs recover the densified phase more reliably near cell boundaries and in intercellular gaps, while capturing tether morphology more faithfully than representative ungated and residual-driven adaptive baselines.

Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 3 of its 40 references that are in the map. First posted on arXiv 31 Mar 2026.

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References · 3

  1. 2016Simple and Scalable Predictive Uncertainty Estimation using Deep Ensemblescited by 3,926
  2. 2020Fourier Features Let Networks Learn High Frequency Functions in Low Dimensional Domainscited by 2,200
  3. 2021Characterizing possible failure modes in physics-informed neural networkscited by 643

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