Low Latency GNN Accelerator for Quantum Error Correction

Quantum computers can solve selected problems more efficiently than classical computers, but current devices are limited by high physical error rates. Quantum Error Correction (QEC) mitigates this by encoding many physical qubits into a logical qubit, with the surface code among the most widely studied approaches. Since syndrome measurements are produced continuously, the decoder must process them fast enough to avoid becoming a system bottleneck, making real-time decoding essential for fault-tolerant quantum computing. While most state-of-the-art real-time decoders rely on Minimum-Weight Perfect Matching (MWPM), we instead use a high-accuracy Graph Neural Network (GNN) that trades higher computational cost for lower logical error rates. To make this GNN practical for real-time decoding, we apply algorithm-hardware co-design. We reduce complexity through hardware-guided pruning and retraining, producing two hardware-friendly models that reduce parameter count by 3.1× and 6.5×. These target, respectively, an average decoding latency of one syndrome cycle and a worst-case latency within one syndrome cycle. We further reduce hardware cost using input-graph filtering and post-training quantization. Based on these optimized models, we propose an FPGA-based architecture for low-latency inference and real-time decoding. Evaluated on surface codes up to distance 7 under circuit-level noise at physical error rate p=10-3, our decoder outperforms MWPM in decoding accuracy for both average-latency and max-latency settings. It reduces logical error rate by 40% at 1μ s average latency, and by 13% under a strict 1μ s deadline.