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Learning Causal Structure of Time Series using Best Order Score Search

arXiv 2603.05370 ↗First posted 5 Mar 2026cs.LG cs.AI stat.MEcited by 0

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Abstract (arXiv)

Causal structure learning from observational data is central to many scientific and policy domains, but the time series setting common to many disciplines poses several challenges due to temporal dependence. In this paper we focus on score-based causal discovery for multivariate time series and introduce TS-BOSS, a time series extension of the recently proposed Best Order Score Search (BOSS) (Andrews et al. 2023). TS-BOSS performs a permutation-based search over dynamic Bayesian network structures while leveraging grow-shrink trees to cache intermediate score computations, preserving the scalability and strong empirical performance of BOSS in the static setting. We provide theoretical guarantees establishing the soundness of TS-BOSS under suitable assumptions, and we present an intermediate result that extends classical subgraph minimality results for permutation-based methods to the dynamic (time series) setting. Our experiments on synthetic data show that TS-BOSS is especially effective in high auto-correlation regimes, where it consistently achieves higher adjacency recall at comparable precision than standard constraint-based methods. Overall, TS-BOSS offers a high-performing, scalable approach for time series causal discovery and our results provide a principled bridge for extending sparsity-based, permutation-driven causal learning theory to dynamic settings.

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References · 15

  1. 2018DAGs with NO TEARS: Continuous Optimization for Structure Learningcited by 745
  2. 2020DYNOTEARS: Structure Learning from Time-Series Datacited by 198
  3. 2013Causal Inference and Causal Explanation with Background Knowledgecited by 168
  4. 2021Beware of the Simulated DAG! Causal Discovery Benchmarks May Be Easy To Gamecited by 159
  5. 2020Discovering contemporaneous and lagged causal relations in autocorrelated nonlinear time series datasetscited by 136
  6. 2022DAGMA: Learning DAGs via M-matrices and a Log-Determinant Acyclicity Characterizationcited by 135
  7. 2013Causal Networks: Semantics and Expressivenesscited by 67
  8. 2022Greedy Relaxations of the Sparsest Permutation Algorithmcited by 63
  9. 2022Causal Structure Learning: a Combinatorial Perspectivecited by 46
  10. 2023Fast Scalable and Accurate Discovery of DAGs Using the Best Order Score Search and Grow-Shrink Treescited by 38
  11. 2023Structure Learning with Continuous Optimization: A Sober Look and Beyondcited by 34
  12. 2023Discovering Causal Relations and Equations from Datacited by 33
3 more
  1. 2021Characterization of causal ancestral graphs for time series with latent confounderscited by 6
  2. 2025Embracing Discrete Search: A Reasonable Approach to Causal Structure Learningcited by 4
  3. 2025An Asymmetric Independence Model for Causal Discovery on Path Spacescited by 2

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