Anonpsy: A Graph-Based Framework for Structure-Preserving De-identification of Psychiatric Narratives
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Abstract (arXiv)
Psychiatric narratives encode patient identity not only through explicit identifiers but also through idiosyncratic life events embedded in their clinical structure. Existing de-identification approaches, including PHI masking and LLM-based synthetic rewriting, operate at the text level and offer limited control over which semantic elements are preserved or altered. We introduce Anonpsy, a de-identification framework that reformulates the task as graph-guided semantic rewriting. Anonpsy (1) converts each narrative into a semantic graph encoding clinical entities, temporal anchors, and typed relations; (2) applies graph-constrained perturbations that modify identifying context while preserving clinically essential structure; and (3) regenerates text via graph-conditioned LLM generation. Evaluated on 90 clinician-authored psychiatric case narratives, Anonpsy preserves diagnostic fidelity while achieving consistently low re-identification risk under expert, semantic, and GPT-5-based evaluations. Compared with a strong LLM-only rewriting baseline, Anonpsy yields substantially lower semantic similarity and identifiability. These results demonstrate that explicit structural representations combined with constrained generation provide an effective approach to de-identification for psychiatric narratives.
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References · 5
- 2019Sentence-BERT: Sentence Embeddings using Siamese BERT-Networkscited by 9,049
- 2023Does Synthetic Data Generation of LLMs Help Clinical Text Mining?cited by 151
- 2016De-identification of Patient Notes with Recurrent Neural Networkscited by 88
- 2023De-identification of clinical free text using natural language processing: A systematic review of current approachescited by 13
- 2025Not What the Doctor Ordered: Surveying LLM-based De-identification and Quantifying Clinical Information Losscited by 3
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