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Hyperbolic Heterogeneous Graph Transformer

arXiv 2601.08251 ↗First posted 13 Jan 2026cs.LG cs.AI cs.SIcited by 0

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Abstract (arXiv)

In heterogeneous graphs, we can observe complex structures such as tree-like or hierarchical structures. Recently, the hyperbolic space has been widely adopted in many studies to effectively learn these complex structures. Although these methods have demonstrated the advantages of the hyperbolic space in learning heterogeneous graphs, most existing methods still have several challenges. They rely heavily on tangent-space operations, which often lead to mapping distortions during frequent transitions. Moreover, their message-passing architectures mainly focus on local neighborhood information, making it difficult to capture global hierarchical structures and long-range dependencies between different types of nodes. To address these limitations, we propose Hyperbolic Heterogeneous Graph Transformer (HypHGT), which effectively and efficiently learns heterogeneous graph representations entirely within the hyperbolic space. Unlike previous message-passing based hyperbolic heterogeneous GNNs, HypHGT naturally captures both local and global dependencies through transformer-based architecture. Furthermore, the proposed relation-specific hyperbolic attention mechanism in HypHGT, which operates with linear time complexity, enables efficient computation while preserving the heterogeneous information across different relation types. This design allows HypHGT to effectively capture the complex structural properties and semantic information inherent in heterogeneous graphs. We conduct comprehensive experiments to evaluate the effectiveness and efficiency of HypHGT, and the results demonstrate that it consistently outperforms state-of-the-art methods in node classification task, with significantly reduced training time and memory usage.

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References · 23

  1. 2017Attention Is All You Needcited by 59,932
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  3. 2017Graph Attention Networkscited by 8,854
  4. 2019A Comprehensive Survey on Graph Neural Networkscited by 2,906
  5. 2018Graph Neural Networks: A Review of Methods and Applicationscited by 1,571
  6. 2019Heterogeneous Graph Attention Networkcited by 732
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  8. 2019Graph Transformer Networkscited by 520
  9. 2019Hyperbolic Graph Convolutional Neural Networkscited by 400
  10. 2021A Survey of Transformerscited by 399
  11. 2020MAGNN: Metapath Aggregated Graph Neural Network for Heterogeneous Graph Embeddingcited by 304
  12. 2019Hyperbolic Graph Neural Networkscited by 244
11 more
  1. 2021Are we really making much progress? Revisiting, benchmarking, and refining heterogeneous graph neural networkscited by 176
  2. 2022Hyperbolic Vision Transformers: Combining Improvements in Metric Learningcited by 109
  3. 2021Fully Hyperbolic Neural Networkscited by 107
  4. 2019Hyperbolic Graph Attention Networkcited by 69
  5. 2022A General Survey on Attention Mechanisms in Deep Learningcited by 64
  6. 2024Hypformer: Exploring Efficient Transformer Fully in Hyperbolic Spacecited by 39
  7. 2020Heterogeneous Molecular Graph Neural Networks for Predicting Molecule Propertiescited by 30
  8. 2023The Expressive Power of Graph Neural Networks: A Surveycited by 27
  9. 2020Curvature Regularization to Prevent Distortion in Graph Embeddingcited by 8
  10. 2024Hyperbolic Heterogeneous Graph Attention Networkscited by 5
  11. 2024Multi-Hyperbolic Space-based Heterogeneous Graph Attention Networkcited by 2

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