Cycles Communities from the Perspective of Dendrograms and Gradient Sampling
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Abstract (arXiv)
Identifying and comparing topological features, particularly cycles, across different topological objects remains a fundamental challenge in persistent homology and topological data analysis. This work introduces a novel framework for constructing cycle communities through two complementary approaches. First, a dendrogram-based methodology leverages merge-tree algorithms to construct hierarchical representations of homology classes from persistence intervals. The Wasserstein distance on merge trees is introduced as a metric for comparing dendrograms, establishing connections to hierarchical clustering frameworks. Through simulation studies, the discriminative power of dendrogram representations for identifying cycle communities is demonstrated. Second, an extension of Stratified Gradient Sampling simultaneously learns multiple filter functions that yield cycle barycenter functions capable of faithfully reconstructing distinct sets of cycles. The set of cycles each filter function can reconstruct constitutes cycle communities that are non-overlapping and partition the space of all cycles. Together, these approaches transform the problem of cycle matching into both a hierarchical clustering and topological optimization framework, providing principled methods to identify similar topological structures both within and across groups of topological objects.
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References · 12
- 2017Hierarchical Clustering: Objective Functions and Algorithmscited by 60
- 2019A Framework for Differential Calculus on Persistence Barcodescited by 29
- 2021Wasserstein Distances, Geodesics and Barycenters of Merge Treescited by 16
- 2017Volume Optimal Cycle: Tightest representative cycle of a generator on persistent homologycited by 12
- 2021Cycle Registration in Persistent Homology with Applications in Topological Bootstrapcited by 8
- 2021A Gradient Sampling Algorithm for Stratified Maps with Applications to Topological Data Analysiscited by 5
- 2014Persistent Homology in Sparse Regression and its Application to Brain Morphometrycited by 3
- 2022Fast Topological Signal Identification and Persistent Cohomological Cycle Matchingcited by 2
- 2024A Subsequence Approach to Topological Data Analysis for Irregularly-Spaced Time Seriescited by 1
- 2025MaxTDA: Robust Statistical Inference for Maximal Persistence in Topological Data Analysiscited by 1
- 2025Discrete Heat Kernels on Simplicial Complexes and Its Application to Functional Brain Networkscited by 1
- 2025Topologically Invariant Permutation Testcited by 1
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