Procrustean Bed for AI-Driven Retrosynthesis: A Unified Framework for Reproducible Evaluation
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Abstract (arXiv)
Progress in computer-aided synthesis planning (CASP) is obscured by the lack of standardized evaluation infrastructure and the reliance on metrics that prioritize topological completion over chemical validity. We introduce RetroCast, a unified evaluation suite that standardizes heterogeneous model outputs into a common schema to enable statistically rigorous, apples-to-apples comparison. The framework includes a reproducible benchmarking pipeline with stratified sampling and bootstrapped confidence intervals, accompanied by SynthArena, an interactive platform for qualitative route inspection. We utilize this infrastructure to evaluate leading search-based and sequence-based algorithms on a new suite of standardized benchmarks. Our analysis reveals a divergence between "solvability" (stock-termination rate) and route quality; high solvability scores often mask chemical invalidity or fail to correlate with the reproduction of experimental ground truths. Furthermore, we identify a "complexity cliff" in which search-based methods, despite high solvability rates, exhibit a sharp performance decay in reconstructing long-range synthetic plans compared to sequence-based approaches. We release the full framework, benchmark definitions, and a standardized database of model predictions to support transparent and reproducible development in the field.
Key facts. Cited by 4 papers in the map (data through 7 Oct 2026). Builds on 16 of its 33 references that are in the map. First posted on arXiv 8 Dec 2025.
Builds on
16 of 33 references.
References · 16
- 2020Language Models are Few-Shot Learnerscited by 32,199
- 2023Sparks of Artificial General Intelligence: Early experiments with GPT-4cited by 2,579
- 2017Learning to Plan Chemical Synthesescited by 175
- 2020Retrosynthesis Prediction with Conditional Graph Logic Networkcited by 103
- 2017Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Networkcited by 102
- 2020Retro*: Learning Retrosynthetic Planning with Neural Guided A* Searchcited by 75
- 2023Re-evaluating Retrosynthesis Algorithms with Syntheseuscited by 26
- 2024Double-Ended Synthesis Planning with Goal-Constrained Bidirectional Searchcited by 24
- 2021Self-Improved Retrosynthetic Planningcited by 23
- 2022RetroGraph: Retrosynthetic Planning with Graph Searchcited by 23
- 2021Retrosynthetic Planning with Experience-Guided Monte Carlo Tree Searchcited by 14
- 2022FusionRetro: Molecule Representation Fusion via In-Context Learning for Retrosynthetic Planningcited by 14
4 more
- 2024DirectMultiStep: Direct Route Generation for Multistep Retrosynthesiscited by 11
- 2024RetroGFN: Diverse and Feasible Retrosynthesis using GFlowNetscited by 10
- 2025SynLlama: Generating Synthesizable Molecules and Their Analogs with Large Language Modelscited by 9
- 2024Chemist-aligned retrosynthesis by ensembling diverse inductive bias modelscited by 5
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Citing papers per year: 2026: 4.
4 papers.
- 2026When Single Answer Is Not Enough: Rethinking Single-Step Retrosynthesis Benchmarks for LLMscited by 4
- 2026Project Ariadne: Prompt-Conditioned Route Generation for Synthesis Planningcited by 1
- 2026URSA: Chemistry-Aware Benchmark for Utilitarian Retrosynthesis Assessmentcited by 0
- 2026Strategy-first synthesis planning for complex natural productscited by 0
- 2026Strategy-first synthesis planning for complex natural products7 Aug 2026
- 2026URSA: Chemistry-Aware Benchmark for Utilitarian Retrosynthesis Assessment6 Jul 2026
- 2026Project Ariadne: Prompt-Conditioned Route Generation for Synthesis Planning23 Jun 2026
- 2026When Single Answer Is Not Enough: Rethinking Single-Step Retrosynthesis Benchmarks for LLMs3 Feb 2026