THIR: Topological Histopathological Image Retrieval
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Abstract (arXiv)
According to the World Health Organization, breast cancer claimed the lives of approximately 685,000 women in 2020. Early diagnosis and accurate clinical decision making are critical in reducing this global burden. In this study, we propose THIR, a novel Content-Based Medical Image Retrieval (CBMIR) framework that leverages topological data analysis specifically, Betti numbers derived from persistent homology to characterize and retrieve histopathological images based on their intrinsic structural patterns. Unlike conventional deep learning approaches that rely on extensive training, annotated datasets, and powerful GPU resources, THIR operates entirely without supervision. It extracts topological fingerprints directly from RGB histopathological images using cubical persistence, encoding the evolution of loops as compact, interpretable feature vectors. The similarity retrieval is then performed by computing the distances between these topological descriptors, efficiently returning the top-K most relevant matches. Extensive experiments on the BreaKHis dataset demonstrate that THIR outperforms state of the art supervised and unsupervised methods. It processes the entire dataset in under 20 minutes on a standard CPU, offering a fast, scalable, and training free solution for clinical image retrieval.
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References · 12
- 2017Dynamic Routing Between Capsulescited by 689
- 2015A roadmap for the computation of persistent homologycited by 127
- 2017Machine learning methods for histopathological image analysiscited by 79
- 2020A Decade Survey of Content Based Image Retrieval using Deep Learningcited by 72
- 2019Similar Image Search for Histopathology: SMILYcited by 41
- 2019Yottixel -- An Image Search Engine for Large Archives of Histopathology Whole Slide Imagescited by 41
- 2019Pan-Cancer Diagnostic Consensus Through Searching Archival Histopathology Images Using Artificial Intelligencecited by 26
- 2021TopoTxR: A Topological Biomarker for Predicting Treatment Response in Breast Cancercited by 13
- 2024On Image Search in Histopathologycited by 12
- 2024Equipping Computational Pathology Systems with Artifact Processing Pipelines: A Showcase for Computation and Performance Trade-offscited by 11
- 2023Towards More Transparent and Accurate Cancer Diagnosis with an Unsupervised CAE Approachcited by 4
- 2024Siamese Content-based Search Engine for a More Transparent Skin and Breast Cancer Diagnosis through Histological Imagingcited by 2
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