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Improving Diagnostic Performance on Small and Imbalanced Datasets Using Class-Based Input Image Composition

arXiv 2511.03891 ↗First posted 5 Nov 2025cs.CV cs.AI cs.DBcited by 0

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Abstract (arXiv)

Small, imbalanced datasets and poor input image quality can lead to high false predictions rates with deep learning models. This paper introduces Class-Based Image Composition, an approach that allows us to reformulate training inputs through a fusion of multiple images of the same class into combined visual composites, named Composite Input Images (CoImg). That enhances the intra-class variance and improves the valuable information density per training sample and increases the ability of the model to distinguish between subtle disease patterns. Our method was evaluated on the Optical Coherence Tomography Dataset for Image-Based Deep Learning Methods (OCTDL) (Kulyabin et al., 2024), which contains 2,064 high-resolution optical coherence tomography (OCT) scans of the human retina, representing seven distinct diseases with a significant class imbalance. We constructed a perfectly class-balanced version of this dataset, named Co-OCTDL, where each scan is resented as a 3x1 layout composite image. To assess the effectiveness of this new representation, we conducted a comparative analysis between the original dataset and its variant using a VGG16 model. A fair comparison was ensured by utilizing the identical model architecture and hyperparameters for all experiments. The proposed approach markedly improved diagnostic results.The enhanced Dataset achieved near-perfect accuracy (99.6%) with F1-score (0.995) and AUC (0.9996), compared to a baseline model trained on raw dataset. The false prediction rate was also significantly lower, this demonstrates that the method can producehigh-quality predictions even for weak datasets affected by class imbalance or small sample size.

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References · 11

  1. 2021TransUNet: Transformers Make Strong Encoders for Medical Image Segmentationcited by 1,558
  2. 2019Class-Balanced Loss Based on Effective Number of Samplescited by 1,245
  3. 2021Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentationcited by 1,222
  4. 2020Asymmetric Loss For Multi-Label Classificationcited by 381
  5. 2019Transfusion: Understanding Transfer Learning for Medical Imagingcited by 368
  6. 2018GAN-based Synthetic Medical Image Augmentation for increased CNN Performance in Liver Lesion Classificationcited by 242
  7. 2017Medical Image Analysis using Convolutional Neural Networks: A Reviewcited by 99
  8. 2021Unified Focal loss: Generalising Dice and cross entropy-based losses to handle class imbalanced medical image segmentationcited by 88
  9. 2023Synthetic CT Generation from MRI using 3D Transformer-based Denoising Diffusion Modelcited by 29
  10. 2022Masked Distillation with Receptive Tokenscited by 23
  11. 2023Studying the Impact of Augmentations on Medical Confidence Calibrationcited by 3

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