TopoAlign: A Framework for Aligning Code to Math via Topological Decomposition

Large Language Models (LLMs) excel at both informal and formal (e.g. Lean 4) mathematical reasoning but still struggle with autoformalisation, the task of transforming informal into formal mathematical statements. Yet, the performance of current Math LLMs is constrained by the scarcity of large-scale corpora, particularly those containing pairs of informal and formal statements. Interestingly, the formal languages used in autoformalisation share structural similarities with programming languages, and code data is available at scale. However, current models trained on code do not transfer effectively to formal math, due to structural and syntactic differences between them. To address this, we propose TopoAlign, a framework that unlocks widely available code repositories as training resources for Math LLMs. TopoAlign decomposes code into docstrings, main functions, and dependency functions, and reassembles these components into analogues that structurally mirror formal statements. We train three state-of-the-art models, DeepSeek-Math, Qwen-3 and Herald, and evaluate them on the MiniF2F, Putnam, and ProofNet benchmarks. TopoAlign provides substantial gains for DeepSeek-Math, improving performance by 17.77% on BEq@10 and 68.82% on typecheck@10, and also measurably improves Herald by 0.12% on BEq@10 and 1.09% on typecheck@10 despite introducing no new mathematical knowledge.