mlsanityData to 14 Oct 2026

Inference Gap in Domain Expertise and Machine Intelligence in Named Entity Recognition: Creation of and Insights from a Substance Use-related Dataset

arXiv 2508.19467 ↗First posted 26 Aug 2025cs.CL cs.AI cs.IRcited by 0

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Abstract (arXiv)

Nonmedical opioid use is an urgent public health challenge, with far-reaching clinical and social consequences that are often underreported in traditional healthcare settings. Social media platforms, where individuals candidly share first-person experiences, offer a valuable yet underutilized source of insight into these impacts. In this study, we present a named entity recognition (NER) framework to extract two categories of self-reported consequences from social media narratives related to opioid use: ClinicalImpacts (e.g., withdrawal, depression) and SocialImpacts (e.g., job loss). To support this task, we introduce RedditImpacts 2.0, a high-quality dataset with refined annotation guidelines and a focus on first-person disclosures, addressing key limitations of prior work. We evaluate both fine-tuned encoder-based models and state-of-the-art large language models (LLMs) under zero- and few-shot in-context learning settings. Our fine-tuned DeBERTa-large model achieves a relaxed token-level F1 of 0.61 [95% CI: 0.43-0.62], consistently outperforming LLMs in precision, span accuracy, and adherence to task-specific guidelines. Furthermore, we show that strong NER performance can be achieved with substantially less labeled data, emphasizing the feasibility of deploying robust models in resource-limited settings. Our findings underscore the value of domain-specific fine-tuning for clinical NLP tasks and contribute to the responsible development of AI tools that may enhance addiction surveillance, improve interpretability, and support real-world healthcare decision-making. The best performing model, however, still significantly underperforms compared to inter-expert agreement (Cohen's kappa: 0.81), demonstrating that a gap persists between expert intelligence and current state-of-the-art NER/AI capabilities for tasks requiring deep domain knowledge.

Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 19 of its 58 references that are in the map. First posted on arXiv 26 Aug 2025.

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References · 19

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7 more
  1. 2023Identifying and Extracting Rare Disease Phenotypes with Large Language Modelscited by 18
  2. 2022AIONER: All-in-one scheme-based biomedical named entity recognition using deep learningcited by 13
  3. 2024RAMIE: Retrieval-Augmented Multi-task Information Extraction with Large Language Models on Dietary Supplementscited by 11
  4. 2024Reddit-Impacts: A Named Entity Recognition Dataset for Analyzing Clinical and Social Effects of Substance Use Derived from Social Mediacited by 9
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  6. 2025Do LLMs Surpass Encoders for Biomedical NER?cited by 6
  7. 2021Recognising Biomedical Names: Challenges and Solutionscited by 3

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