Diagnostic Accuracy of Open-Source Vision-Language Models on Diverse Medical Imaging Tasks
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Abstract (arXiv)
This retrospective study evaluated five VLMs (Qwen2.5, Phi-4, Gemma3, Llama3.2, and Mistral3.1) using the MedFMC dataset. This dataset includes 22,349 images from 7,461 patients encompassing chest radiography (19 disease multi-label classifications), colon pathology (tumor detection), endoscopy (colorectal lesion identification), neonatal jaundice assessment (skin color-based treatment necessity), and retinal fundoscopy (5-point diabetic retinopathy grading). Diagnostic accuracy was compared in three experimental settings: visual input only, multimodal input, and chain-of-thought reasoning. Model accuracy was assessed against ground truth labels, with statistical comparisons using bootstrapped confidence intervals (p<.05). Qwen2.5 achieved the highest accuracy for chest radiographs (90.4%) and endoscopy images (84.2%), significantly outperforming the other models (p<.001). In colon pathology, Qwen2.5 (69.0%) and Phi-4 (69.6%) performed comparably (p=.41), both significantly exceeding other VLMs (p<.001). Similarly, for neonatal jaundice assessment, Qwen2.5 (58.3%) and Phi-4 (58.1%) showed comparable leading accuracies (p=.93) significantly exceeding their counterparts (p<.001). All models struggled with retinal fundoscopy; Qwen2.5 and Gemma3 achieved the highest, albeit modest, accuracies at 18.6% (comparable, p=.99), significantly better than other tested models (p<.001). Unexpectedly, multimodal input reduced accuracy for some models and modalities, and chain-of-thought reasoning prompts also failed to improve accuracy. The open-source VLMs demonstrated promising diagnostic capabilities, particularly in chest radiograph interpretation. However, performance in complex domains such as retinal fundoscopy was limited, underscoring the need for further development and domain-specific adaptation before widespread clinical application.
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References · 10
- 2022Chain-of-Thought Prompting Elicits Reasoning in Large Language Modelscited by 12,459
- 2025Qwen2.5-VL Technical Reportcited by 5,587
- 2022Large Language Models are Zero-Shot Reasonerscited by 4,374
- 2025Gemma 3 Technical Reportcited by 1,824
- 2024Phi-4 Technical Reportcited by 711
- 2023Adapted Large Language Models Can Outperform Medical Experts in Clinical Text Summarizationcited by 246
- 2025MedVLM-R1: Incentivizing Medical Reasoning Capability of Vision-Language Models (VLMs) via Reinforcement Learningcited by 173
- 2025Med-R1: Reinforcement Learning for Generalizable Medical Reasoning in Vision-Language Modelscited by 144
- 2023MedFMC: A Real-world Dataset and Benchmark For Foundation Model Adaptation in Medical Image Classificationcited by 38
- 2024Open Challenges and Opportunities in Federated Foundation Models Towards Biomedical Healthcarecited by 12
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