mlsanityData to 14 Oct 2026

Large Language Model-Based Agents for Automated Research Reproducibility: An Exploratory Study in Alzheimer's Disease

arXiv 2505.23852 ↗First posted 29 May 2025cs.CL cs.AI cs.MAcited by 1

On the map: LLM agents and tool use → Medical and scientific domain agents

Abstract (arXiv)

Objective: To demonstrate the capabilities of Large Language Models (LLMs) as autonomous agents to reproduce findings of published research studies using the same or similar dataset. Materials and Methods: We used the "Quick Access" dataset of the National Alzheimer's Coordinating Center (NACC). We identified highly cited published research manuscripts using NACC data and selected five studies that appeared reproducible using this dataset alone. Using GPT-4o, we created a simulated research team of LLM-based autonomous agents tasked with writing and executing code to dynamically reproduce the findings of each study, given only study Abstracts, Methods sections, and data dictionary descriptions of the dataset. Results: We extracted 35 key findings described in the Abstracts across 5 Alzheimer's studies. On average, LLM agents approximately reproduced 53.2% of findings per study. Numeric values and range-based findings often differed between studies and agents. The agents also applied statistical methods or parameters that varied from the originals, though overall trends and significance were sometimes similar. Discussion: In some cases, LLM-based agents replicated research techniques and findings. In others, they failed due to implementation flaws or missing methodological detail. These discrepancies show the current limits of LLMs in fully automating reproducibility assessments. Still, this early investigation highlights the potential of structured agent-based systems to provide scalable evaluation of scientific rigor. Conclusion: This exploratory work illustrates both the promise and limitations of LLMs as autonomous agents for automating reproducibility in biomedical research.

Key facts. Cited by 1 paper in the map (data through 14 Oct 2026). Placed in Medical and scientific domain agents, one of 16 directions in LLM agents and tool use. Builds on 16 of its 54 references that are in the map. First posted on arXiv 29 May 2025.

Builds on

16 of 54 references.

References · 16

  1. 2024GPT-4o System Cardcited by 4,588
  2. 2023Generative Agents: Interactive Simulacra of Human Behaviorcited by 3,568
  3. 2023A Survey on Large Language Model based Autonomous Agentscited by 2,242
  4. 2024CodeAgent: Enhancing Code Generation with Tool-Integrated Agent Systems for Real-World Repo-level Coding Challengescited by 282
  5. 2023Can Large Language Models Transform Computational Social Science?cited by 250
  6. 2023Large Language Models for Generative Information Extraction: A Surveycited by 185
  7. 2023Chain of Hindsight Aligns Language Models with Feedbackcited by 148
  8. 2024Empowering Biomedical Discovery with AI Agentscited by 118
  9. 2023Diagnostic Reasoning Prompts Reveal the Potential for Large Language Model Interpretability in Medicinecited by 83
  10. 2023LLMs4OL: Large Language Models for Ontology Learningcited by 77
  11. 2024Autonomous LLM-driven research from data to human-verifiable research paperscited by 53
  12. 2023Blind Judgement: Agent-Based Supreme Court Modelling With GPTcited by 38
4 more
  1. 2023The SocialAI School: Insights from Developmental Psychology Towards Artificial Socio-Cultural Agentscited by 24
  2. 2023LeafAI: query generator for clinical cohort discovery rivaling a human programmercited by 9
  3. 2024Generalizable and Scalable Multistage Biomedical Concept Normalization Leveraging Large Language Modelscited by 7
  4. 2022SIERRA: A Modular Framework for Research Automation and Reproducibilitycited by 1

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Citing papers per year: 2026: 1.

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  1. 2026AD-CARE: A Guideline-grounded, Modality-agnostic LLM Agent for Real-world Alzheimer's Disease Diagnosis with Multi-cohort Assessment, Fairness Analysis, and Reader Study
  2. 2026Dementia-Agents: A Multi-Modal Multi-Agent System for Dementia Staging and Phenotyping
  3. 2026NeuroAgent: LLM Agents for Multimodal Neuroimaging Analysis and Research
  4. 2025Addressing accuracy and hallucination of LLMs in Alzheimer's disease research through knowledge graphs
  5. 2026Chain-of-Thought Reasoning with Large Language Models for Clinical Alzheimer's Disease Assessment and Diagnosis
  6. 2025ADAM: An AI Reasoning and Bioinformatics Model for Alzheimer's Disease Detection and Microbiome-Clinical Data Integration
  7. 2026Agentic coding without the cloud: evaluating open-weight large language models on longitudinal data preparation tasks
  8. 2026Can LLM Agents Generate Real-World Evidence? Evaluating Observational Studies in Medical Databases