Connecting Large Language Model Agent to High Performance Computing Resource
On the map: LLM agents and tool use → Web, search, and research agents
Abstract (arXiv)
The Large Language Model agent workflow enables the LLM to invoke tool functions to increase the performance on specific scientific domain questions. To tackle large scale of scientific research, it requires access to computing resource and parallel computing setup. In this work, we implemented Parsl to the LangChain/LangGraph tool call setup, to bridge the gap between the LLM agent to the computing resource. Two tool call implementations were set up and tested on both local workstation and HPC environment on Polaris/ALCF. The first implementation with Parsl-enabled LangChain tool node queues the tool functions concurrently to the Parsl workers for parallel execution. The second configuration is implemented by converting the tool functions into Parsl ensemble functions, and is more suitable for large task on super computer environment. The LLM agent workflow was prompted to run molecular dynamics simulations, with different protein structure and simulation conditions. These results showed the LLM agent tools were managed and executed concurrently by Parsl on the available computing resource.
Key facts. Cited by 3 papers in the map (data through 14 Oct 2026). Placed in Web, search, and research agents, one of 16 directions in LLM agents and tool use. Builds on 6 of its 30 references that are in the map. First posted on arXiv 17 Feb 2025.
Builds on
6 of 30 references.
References · 6
- 2023Toolformer: Language Models Can Teach Themselves to Use Toolscited by 4,182
- 2023Plan-and-Solve Prompting: Improving Zero-Shot Chain-of-Thought Reasoning by Large Language Modelscited by 560
- 2019DeepDriveMD: Deep-Learning Driven Adaptive Molecular Simulations for Protein Foldingcited by 15
- 2021Colmena: Scalable Machine-Learning-Based Steering of Ensemble Simulations for High Performance Computingcited by 10
- 2021Coupling streaming AI and HPC ensembles to achieve 100-1000x faster biomolecular simulationscited by 8
- 2024Optimizing adaptive sampling via Policy Rankingcited by 1
Built on by
Citing papers per year: 2026: 3.
3 papers.
- 2026Trusted Credentials, Untrusted Behavior: Benchmarking LLM-Agent Security in High-Performance Computingcited by 3
- 2026From Agent Loops to Deterministic Graphs: Execution Lineage for Reproducible AI-Native Workcited by 2
- 2026Multi-Agent Discovery and Resource-Aware Autonomous Exploration of Scientific Datasetscited by 0
- 2026Multi-Agent Discovery and Resource-Aware Autonomous Exploration of Scientific Datasets22 Aug 2026
- 2026Trusted Credentials, Untrusted Behavior: Benchmarking LLM-Agent Security in High-Performance Computing20 Jul 2026
- 2026From Agent Loops to Deterministic Graphs: Execution Lineage for Reproducible AI-Native Work7 May 2026
Similar, not cited
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- 2026Evaluating LLM-generated code for domain-specific languages: molecular dynamics with LAMMPS
- 2024A Review of Large Language Models and Autonomous Agents in Chemistry
- 2025LLM Agents Making Agent Tools
- 2025ScaleMCP: Dynamic and Auto-Synchronizing Model Context Protocol Tools for LLM Agents
- 2025Towards Scientific Intelligence: A Survey of LLM-based Scientific Agents
- 2025MDCrow: Automating Molecular Dynamics Workflows with Large Language Models
- 2026Multi-Agent Orchestration for High-Throughput Materials Screening on a Leadership-Class System
- 2025Workflows vs Agents for Code Translation