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Reusable specimen-level inference in computational pathology

arXiv 2501.05945 ↗First posted 10 Jan 2025eess.IV cs.CV q-bio.TOcited by 0

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Abstract (arXiv)

Foundation models for computational pathology have shown great promise for specimen-level tasks and are increasingly accessible to researchers. However, specimen-level models built on these foundation models remain largely unavailable, hindering their broader utility and impact. To address this gap, we developed SpinPath, a toolkit designed to democratize specimen-level deep learning by providing a zoo of pretrained specimen-level models, a Python-based inference engine, and a JavaScript-based inference platform. We demonstrate the utility of SpinPath in metastasis detection tasks across nine foundation models. SpinPath may foster reproducibility, simplify experimentation, and accelerate the adoption of specimen-level deep learning in computational pathology research.

Key facts. No citing papers in the map yet (data through 14 Oct 2026). First posted on arXiv 10 Jan 2025.

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