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Classification and Morphological Analysis of DLBCL Subtypes in H&E-Stained Slides

arXiv 2411.08531 ↗First posted 13 Nov 2024cs.CVcited by 0

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Abstract (arXiv)

We address the challenge of automated classification of diffuse large B-cell lymphoma (DLBCL) into its two primary subtypes: activated B-cell-like (ABC) and germinal center B-cell-like (GCB). Accurate classification between these subtypes is essential for determining the appropriate therapeutic strategy, given their distinct molecular profiles and treatment responses. Our proposed deep learning model demonstrates robust performance, achieving an average area under the curve (AUC) of (87.4 pm 5.7)% during cross-validation. It shows a high positive predictive value (PPV), highlighting its potential for clinical application, such as triaging for molecular testing. To gain biological insights, we performed an analysis of morphological features of ABC and GCB subtypes. We segmented cell nuclei using a pre-trained deep neural network and compared the statistics of geometric and color features for ABC and GCB. We found that the distributions of these features were not very different for the two subtypes, which suggests that the visual differences between them are more subtle. These results underscore the potential of our method to assist in more precise subtype classification and can contribute to improved treatment management and outcomes for patients of DLBCL.

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References · 11

  1. 2015Deep Residual Learning for Image Recognitioncited by 52,096
  2. 2021Swin Transformer: Hierarchical Vision Transformer using Shifted Windowscited by 12,139
  3. 2019EfficientNet: Rethinking Model Scaling for Convolutional Neural Networkscited by 6,442
  4. 2022A ConvNet for the 2020scited by 3,579
  5. 2018Attention-based Deep Multiple Instance Learningcited by 1,095
  6. 2020Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Imagescited by 745
  7. 2018Cell Detection with Star-convex Polygonscited by 183
  8. 2017RegNet: Multimodal Sensor Registration Using Deep Neural Networkscited by 69
  9. 2024Efficient Quality Control of Whole Slide Pathology Images with Human-in-the-loop Trainingcited by 12
  10. 2020DLBCL-Morph: Morphological features computed using deep learning for an annotated digital DLBCL image setcited by 8
  11. 2022EGFR Mutation Prediction of Lung Biopsy Images using Deep Learningcited by 7

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