Deep vessel segmentation with joint multi-prior encoding
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Abstract (arXiv)
The precise delineation of blood vessels in medical images is critical for many clinical applications, including pathology detection and surgical planning. However, fully-automated vascular segmentation is challenging because of the variability in shape, size, and topology. Manual segmentation remains the gold standard but is time-consuming, subjective, and impractical for large-scale studies. Hence, there is a need for automatic and reliable segmentation methods that can accurately detect blood vessels from medical images. The integration of shape and topological priors into vessel segmentation models has been shown to improve segmentation accuracy by offering contextual information about the shape of the blood vessels and their spatial relationships within the vascular tree. To further improve anatomical consistency, we propose a new joint prior encoding mechanism which incorporates both shape and topology in a single latent space. The effectiveness of our method is demonstrated on the publicly available 3D-IRCADb dataset. More globally, the proposed approach holds promise in overcoming the challenges associated with automatic vessel delineation and has the potential to advance the field of deep priors encoding.
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References · 7
- 2019Optuna: A Next-generation Hyperparameter Optimization Frameworkcited by 2,455
- 2020clDice -- A Novel Topology-Preserving Loss Function for Tubular Structure Segmentationcited by 286
- 2017Anatomically Constrained Neural Networks (ACNN): Application to Cardiac Image Enhancement and Segmentationcited by 109
- 2020High-level Prior-based Loss Functions for Medical Image Segmentation: A Surveycited by 28
- 2019Anatomical Priors for Image Segmentation via Post-Processing with Denoising Autoencoderscited by 14
- 2020TopNet: Topology Preserving Metric Learning for Vessel Tree Reconstruction and Labellingcited by 10
- 2020Multi-structure bone segmentation in pediatric MR images with combined regularization from shape priors and adversarial networkcited by 6
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