A Bayesian Flow Network Framework for Chemistry Tasks
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Abstract (arXiv)
In this work, we introduce ChemBFN, a language model that handles chemistry tasks based on Bayesian flow networks working on discrete data. A new accuracy schedule is proposed to improve the sampling quality by significantly reducing the reconstruction loss. We show evidence that our method is appropriate for generating molecules with satisfied diversity even when a smaller number of sampling steps is used. A classifier-free guidance method is adapted for conditional generation. It is also worthwhile to point out that after generative training, our model can be fine-tuned on regression and classification tasks with the state-of-the-art performance, which opens the gate of building all-in-one models in a single module style. Our model has been open sourced at https://github.com/Augus1999/bayesian-flow-network-for-chemistry.
Key facts. Cited by 6 papers in the map (data through 7 Oct 2026). Builds on 10 of its 34 references that are in the map. First posted on arXiv 28 Jul 2024.
Builds on
10 of 34 references.
References · 10
- 2021RoFormer: Enhanced Transformer with Rotary Position Embeddingcited by 4,581
- 2018GuacaMol: Benchmarking Models for De Novo Molecular Designcited by 294
- 2018Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Modelscited by 270
- 2021ChemRL-GEM: Geometry Enhanced Molecular Representation Learning for Property Predictioncited by 204
- 2018Fr'echet ChemNet Distance: A metric for generative models for molecules in drug discoverycited by 191
- 2017Deep Reinforcement Learning for De-Novo Drug Designcited by 161
- 2018Multi-Objective De Novo Drug Design with Conditional Graph Generative Modelcited by 101
- 2020Mapping the Space of Chemical Reactions Using Attention-Based Neural Networkscited by 70
- 2017ChemTS: An Efficient Python Library for de novo Molecular Generationcited by 32
- 2021Attention Temperature Matters in Abstractive Summarization Distillationcited by 14
Built on by
Citing papers per year: 2024: 1; 2025: 4; 2026: 1.
6 papers.
- 2025Target-Guided Bayesian Flow Networks for Quantitatively Constrained CAD Generationcited by 2
- 2025MolPIF: A Parameter Interpolation Flow Model for Molecule Generationcited by 1
- 2024Sampling Out-of-Distribution Chemical Spaces via Bayesian Flowcited by 0
- 2025IgCraft: A versatile sequence generation framework for antibody discovery and engineeringcited by 0
- 2025Discrete Bayesian Sample Inference for Graph Generationcited by 0
- 2026ChemHyperMag: Physics-informed magnetic hypergraph learning improves molecular ADMET predictioncited by 0
- 2026ChemHyperMag: Physics-informed magnetic hypergraph learning improves molecular ADMET prediction19 Jul 2026
- 2025Discrete Bayesian Sample Inference for Graph Generation4 Nov 2025
- 2025Target-Guided Bayesian Flow Networks for Quantitatively Constrained CAD Generation29 Oct 2025
- 2025MolPIF: A Parameter Interpolation Flow Model for Molecule Generation18 Jul 2025
- 2025IgCraft: A versatile sequence generation framework for antibody discovery and engineering25 Mar 2025
- 2024Sampling Out-of-Distribution Chemical Spaces via Bayesian Flow16 Dec 2024