LLM-Based Section Identifiers Excel on Open Source but Stumble in Real World Applications
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Abstract (arXiv)
Electronic health records (EHR) even though a boon for healthcare practitioners, are growing convoluted and longer every day. Sifting around these lengthy EHRs is taxing and becomes a cumbersome part of physician-patient interaction. Several approaches have been proposed to help alleviate this prevalent issue either via summarization or sectioning, however, only a few approaches have truly been helpful in the past. With the rise of automated methods, machine learning (ML) has shown promise in solving the task of identifying relevant sections in EHR. However, most ML methods rely on labeled data which is difficult to get in healthcare. Large language models (LLMs) on the other hand, have performed impressive feats in natural language processing (NLP), that too in a zero-shot manner, i.e. without any labeled data. To that end, we propose using LLMs to identify relevant section headers. We find that GPT-4 can effectively solve the task on both zero and few-shot settings as well as segment dramatically better than state-of-the-art methods. Additionally, we also annotate a much harder real world dataset and find that GPT-4 struggles to perform well, alluding to further research and harder benchmarks.
Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 8 of its 29 references that are in the map. First posted on arXiv 25 Apr 2024.
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References · 8
- 2018BERT: Pre-training of Deep Bidirectional Transformers for Language Understandingcited by 40,399
- 2020Language Models are Few-Shot Learnerscited by 32,419
- 2023Llama 2: Open Foundation and Fine-Tuned Chat Modelscited by 13,028
- 2023Capabilities of GPT-4 on Medical Challenge Problemscited by 638
- 2023GPT-NER: Named Entity Recognition via Large Language Modelscited by 160
- 2023DeID-GPT: Zero-shot Medical Text De-Identification by GPT-4cited by 130
- 2021Launching into clinical space with medspaCy: a new clinical text processing toolkit in Pythoncited by 40
- 2022Hierarchical Annotation for Building A Suite of Clinical Natural Language Processing Tasks: Progress Note Understandingcited by 13
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