YNetr: Dual-Encoder architecture on Plain Scan Liver Tumors (PSLT)
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Abstract (arXiv)
Background: Liver tumors are abnormal growths in the liver that can be either benign or malignant, with liver cancer being a significant health concern worldwide. However, there is no dataset for plain scan segmentation of liver tumors, nor any related algorithms. To fill this gap, we propose Plain Scan Liver Tumors(PSLT) and YNetr. Methods: A collection of 40 liver tumor plain scan segmentation datasets was assembled and annotated. Concurrently, we utilized Dice coefficient as the metric for assessing the segmentation outcomes produced by YNetr, having advantage of capturing different frequency information. Results: The YNetr model achieved a Dice coefficient of 62.63% on the PSLT dataset, surpassing the other publicly available model by an accuracy margin of 1.22%. Comparative evaluations were conducted against a range of models including UNet 3+, XNet, UNetr, Swin UNetr, Trans-BTS, COTr, nnUNetv2 (2D), nnUNetv2 (3D fullres), MedNext (2D) and MedNext(3D fullres). Conclusions: We not only proposed a dataset named PSLT(Plain Scan Liver Tumors), but also explored a structure called YNetr that utilizes wavelet transform to extract different frequency information, which having the SOTA in PSLT by experiments.
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References · 13
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- 2016V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentationcited by 2,284
- 2021TransUNet: Transformers Make Strong Encoders for Medical Image Segmentationcited by 1,552
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- 2022Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Imagescited by 823
- 2019The Liver Tumor Segmentation Benchmark (LiTS)cited by 504
- 2020UNet 3+: A Full-Scale Connected UNet for Medical Image Segmentationcited by 331
- 2020CHAOS Challenge -- Combined (CT-MR) Healthy Abdominal Organ Segmentationcited by 307
- 2021TransFuse: Fusing Transformers and CNNs for Medical Image Segmentationcited by 258
- 2023MedNeXt: Transformer-driven Scaling of ConvNets for Medical Image Segmentationcited by 161
- 2019Multi-level Wavelet Convolutional Neural Networkscited by 59
- 2018Aerial LaneNet: Lane Marking Semantic Segmentation in Aerial Imagery using Wavelet-Enhanced Cost-sensitive Symmetric Fully Convolutional Neural Networkscited by 11
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