Improving cross-domain brain tissue segmentation in fetal MRI with synthetic data
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Abstract (arXiv)
Segmentation of fetal brain tissue from magnetic resonance imaging (MRI) plays a crucial role in the study of in utero neurodevelopment. However, automated tools face substantial domain shift challenges as they must be robust to highly heterogeneous clinical data, often limited in numbers and lacking annotations. Indeed, high variability of the fetal brain morphology, MRI acquisition parameters, and superresolution reconstruction (SR) algorithms adversely affect the model's performance when evaluated out-of-domain. In this work, we introduce FetalSynthSeg, a domain randomization method to segment fetal brain MRI, inspired by SynthSeg. Our results show that models trained solely on synthetic data outperform models trained on real data in out-ofdomain settings, validated on a 120-subject cross-domain dataset. Furthermore, we extend our evaluation to 40 subjects acquired using lowfield (0.55T) MRI and reconstructed with novel SR models, showcasing robustness across different magnetic field strengths and SR algorithms. Leveraging a generative synthetic approach, we tackle the domain shift problem in fetal brain MRI and offer compelling prospects for applications in fields with limited and highly heterogeneous data.
Key facts. Cited by 7 papers in the map (data through 7 Oct 2026). Builds on 18 of its 34 references that are in the map. First posted on arXiv 22 Mar 2024.
Builds on
18 of 34 references.
References · 18
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6 more
- 2024Multi-Center Fetal Brain Tissue Annotation (FeTA) Challenge 2022 Resultscited by 8
- 2023Comprehensive analysis of synthetic learning applied to neonatal brain MRI segmentationcited by 7
- 2023ASC: Appearance and Structure Consistency for Unsupervised Domain Adaptation in Fetal Brain MRI Segmentationcited by 7
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Citing papers per year: 2024: 2; 2025: 4; 2026: 1.
7 papers.
- 2025Domain-randomized deep learning for neuroimage analysiscited by 6
- 2025Advances in Automated Fetal Brain MRI Segmentation and Biometry: Insights from the FeTA 2024 Challengecited by 4
- 2024Evaluating Synthetic Data Generation for Domain Generalization in Fetal Brain MRI Segmentationcited by 3
- 2025Towards contrast- and pathology-agnostic clinical fetal brain MRI segmentation using SynthSegcited by 2
- 2025Pathological MRI Segmentation by Synthetic Pathological Data Generation in Fetuses and Neonatescited by 1
- 2024Search Wide, Focus Deep: Automated Fetal Brain Extraction with Sparse Training Datacited by 0
- 2026Why Invariance is Not Enough for Biomedical Domain Generalization and How to Fix Itcited by 0
- 2026Why Invariance is Not Enough for Biomedical Domain Generalization and How to Fix It2 Apr 2026
- 2025Domain-randomized deep learning for neuroimage analysis17 Jul 2025
- 2025Advances in Automated Fetal Brain MRI Segmentation and Biometry: Insights from the FeTA 2024 Challenge5 May 2025
- 2025Towards contrast- and pathology-agnostic clinical fetal brain MRI segmentation using SynthSeg14 Apr 2025
- 2025Pathological MRI Segmentation by Synthetic Pathological Data Generation in Fetuses and Neonates31 Jan 2025
- 2024Evaluating Synthetic Data Generation for Domain Generalization in Fetal Brain MRI Segmentation11 Nov 2024
- 2024Search Wide, Focus Deep: Automated Fetal Brain Extraction with Sparse Training Data27 Oct 2024