Crystalformer: Infinitely Connected Attention for Periodic Structure Encoding
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Abstract (arXiv)
Predicting physical properties of materials from their crystal structures is a fundamental problem in materials science. In peripheral areas such as the prediction of molecular properties, fully connected attention networks have been shown to be successful. However, unlike these finite atom arrangements, crystal structures are infinitely repeating, periodic arrangements of atoms, whose fully connected attention results in infinitely connected attention. In this work, we show that this infinitely connected attention can lead to a computationally tractable formulation, interpreted as neural potential summation, that performs infinite interatomic potential summations in a deeply learned feature space. We then propose a simple yet effective Transformer-based encoder architecture for crystal structures called Crystalformer. Compared to an existing Transformer-based model, the proposed model requires only 29.4% of the number of parameters, with minimal modifications to the original Transformer architecture. Despite the architectural simplicity, the proposed method outperforms state-of-the-art methods for various property regression tasks on the Materials Project and JARVIS-DFT datasets.
Key facts. Cited by 15 papers in the map (data through 7 Oct 2026). Builds on 21 of its 43 references that are in the map. First posted on arXiv 18 Mar 2024.
Builds on
21 of 43 references.
References · 21
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- 2016PointNet: Deep Learning on Point Sets for 3D Classification and Segmentationcited by 5,223
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9 more
- 2022Periodic Graph Transformers for Crystal Material Property Predictioncited by 87
- 2023FAENet: Frame Averaging Equivariant GNN for Materials Modelingcited by 72
- 2023Rotation-Invariant Transformer for Point Cloud Matchingcited by 68
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- 2022Crystal Transformer: Self-learning neural language model for Generative and Tinkering Design of Materialscited by 8
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Citing papers per year: 2024: 3; 2025: 10; 2026: 2.
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- 2025ELECTRA: A Cartesian Network for 3D Charge Density Prediction with Floating Orbitalscited by 9
- 2025Bohrium + SciMaster: Building the Infrastructure and Ecosystem for Agentic Science at Scalecited by 8
- 2024Generative Inverse Design of Crystal Structures via Diffusion Models with Transformerscited by 7
- 2025Beyond Structure: Invariant Crystal Property Prediction with Pseudo-Particle Ray Diffractioncited by 4
- 2025Bridging Text and Crystal Structures: Literature-driven Contrastive Learning for Materials Sciencecited by 3
- 2025ContinuouSP: Generative Model for Crystal Structure Prediction with Invariance and Continuitycited by 1
- 2025ReciNet: Reciprocal Space-Aware Long-Range Modeling for Crystalline Property Predictioncited by 1
- 2024PDDFormer: Pairwise Distance Distribution Graph Transformer for Crystal Material Property Predictioncited by 0
- 2024Adaptable Method for Crystal Design across Diverse Constraints and Objectives with Pretrained Property Predictorscited by 0
- 2025MoMa: A Modular Deep Learning Framework for Material Property Predictioncited by 0
- 2025RecCrysFormer: Refined Protein Structural Prediction from 3D Patterson Maps via Recycling Training Runscited by 0
- 2025CrystalFramer: Rethinking the Role of Frames for SE(3)-Invariant Crystal Structure Modelingcited by 0
- 2026MatBind: A Shared Embedding Space for Multimodal Materials Characterization9 Jul 2026
- 2026Offline Materials Optimization with CliqueFlowmer6 Mar 2026
- 2025Bohrium + SciMaster: Building the Infrastructure and Ecosystem for Agentic Science at Scale23 Dec 2025
- 2025Synthesizability Prediction of Crystalline Structures with Structure-Aware Feature Learning and Uncertainty Quantification22 Oct 2025
- 2025Beyond Structure: Invariant Crystal Property Prediction with Pseudo-Particle Ray Diffraction26 Sep 2025
- 2025ELECTRA: A Cartesian Network for 3D Charge Density Prediction with Floating Orbitals11 Mar 2025
- 2025CrystalFramer: Rethinking the Role of Frames for SE(3)-Invariant Crystal Structure Modeling4 Mar 2025
- 2025RecCrysFormer: Refined Protein Structural Prediction from 3D Patterson Maps via Recycling Training Runs28 Feb 2025
- 2025MoMa: A Modular Deep Learning Framework for Material Property Prediction21 Feb 2025
- 2025ReciNet: Reciprocal Space-Aware Long-Range Modeling for Crystalline Property Prediction4 Feb 2025
- 2025ContinuouSP: Generative Model for Crystal Structure Prediction with Invariance and Continuity4 Feb 2025
- 2025Bridging Text and Crystal Structures: Literature-driven Contrastive Learning for Materials Science22 Jan 2025
3 more
- 2024Adaptable Method for Crystal Design across Diverse Constraints and Objectives with Pretrained Property Predictors11 Oct 2024
- 2024PDDFormer: Pairwise Distance Distribution Graph Transformer for Crystal Material Property Prediction23 Aug 2024
- 2024Generative Inverse Design of Crystal Structures via Diffusion Models with Transformers13 Jun 2024
- 2025ELECTRA: A Cartesian Network for 3D Charge Density Prediction with Floating Orbitalscited by 9
- 2025Beyond Structure: Invariant Crystal Property Prediction with Pseudo-Particle Ray Diffractioncited by 4
- 2025Bridging Text and Crystal Structures: Literature-driven Contrastive Learning for Materials Sciencecited by 3
- 2025ContinuouSP: Generative Model for Crystal Structure Prediction with Invariance and Continuitycited by 1
- 2025ReciNet: Reciprocal Space-Aware Long-Range Modeling for Crystalline Property Predictioncited by 1
- 2024PDDFormer: Pairwise Distance Distribution Graph Transformer for Crystal Material Property Predictioncited by 0
- 2024Adaptable Method for Crystal Design across Diverse Constraints and Objectives with Pretrained Property Predictorscited by 0
- 2025MoMa: A Modular Deep Learning Framework for Material Property Predictioncited by 0
- 2025RecCrysFormer: Refined Protein Structural Prediction from 3D Patterson Maps via Recycling Training Runscited by 0
- 2025CrystalFramer: Rethinking the Role of Frames for SE(3)-Invariant Crystal Structure Modelingcited by 0
- 2025Synthesizability Prediction of Crystalline Structures with Structure-Aware Feature Learning and Uncertainty Quantificationcited by 0
- 2026Offline Materials Optimization with CliqueFlowmercited by 0
12 most cited of 13 All 13 (JSON)
- 2026MatBind: A Shared Embedding Space for Multimodal Materials Characterization9 Jul 2026
- 2026Offline Materials Optimization with CliqueFlowmer6 Mar 2026
- 2025Synthesizability Prediction of Crystalline Structures with Structure-Aware Feature Learning and Uncertainty Quantification22 Oct 2025
- 2025Beyond Structure: Invariant Crystal Property Prediction with Pseudo-Particle Ray Diffraction26 Sep 2025
- 2025ELECTRA: A Cartesian Network for 3D Charge Density Prediction with Floating Orbitals11 Mar 2025
- 2025CrystalFramer: Rethinking the Role of Frames for SE(3)-Invariant Crystal Structure Modeling4 Mar 2025
- 2025RecCrysFormer: Refined Protein Structural Prediction from 3D Patterson Maps via Recycling Training Runs28 Feb 2025
- 2025MoMa: A Modular Deep Learning Framework for Material Property Prediction21 Feb 2025
- 2025ReciNet: Reciprocal Space-Aware Long-Range Modeling for Crystalline Property Prediction4 Feb 2025
- 2025ContinuouSP: Generative Model for Crystal Structure Prediction with Invariance and Continuity4 Feb 2025
- 2025Bridging Text and Crystal Structures: Literature-driven Contrastive Learning for Materials Science22 Jan 2025
- 2024Adaptable Method for Crystal Design across Diverse Constraints and Objectives with Pretrained Property Predictors11 Oct 2024
12 newest of 13 All 13 (JSON)