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Towards Reducing Diagnostic Errors with Interpretable Risk Prediction

arXiv 2402.10109 ↗First posted 15 Feb 2024cs.AI cs.CL cs.LGcited by 0

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Abstract (arXiv)

Many diagnostic errors occur because clinicians cannot easily access relevant information in patient Electronic Health Records (EHRs). In this work we propose a method to use LLMs to identify pieces of evidence in patient EHR data that indicate increased or decreased risk of specific diagnoses; our ultimate aim is to increase access to evidence and reduce diagnostic errors. In particular, we propose a Neural Additive Model to make predictions backed by evidence with individualized risk estimates at time-points where clinicians are still uncertain, aiming to specifically mitigate delays in diagnosis and errors stemming from an incomplete differential. To train such a model, it is necessary to infer temporally fine-grained retrospective labels of eventual "true" diagnoses. We do so with LLMs, to ensure that the input text is from before a confident diagnosis can be made. We use an LLM to retrieve an initial pool of evidence, but then refine this set of evidence according to correlations learned by the model. We conduct an in-depth evaluation of the usefulness of our approach by simulating how it might be used by a clinician to decide between a pre-defined list of differential diagnoses.

Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 11 of its 21 references that are in the map. First posted on arXiv 15 Feb 2024.

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References · 11

  1. 2019Sentence-BERT: Sentence Embeddings using Siamese BERT-Networkscited by 9,170
  2. 2021Finetuned Language Models Are Zero-Shot Learnerscited by 3,780
  3. 2022Scaling Instruction-Finetuned Language Modelscited by 3,024
  4. 2020MiniLM: Deep Self-Attention Distillation for Task-Agnostic Compression of Pre-Trained Transformerscited by 1,463
  5. 2019Publicly Available Clinical BERT Embeddingscited by 1,002
  6. 2020Med-BERT: pre-trained contextualized embeddings on large-scale structured electronic health records for disease predictioncited by 373
  7. 2020Neural Additive Models: Interpretable Machine Learning with Neural Netscited by 319
  8. 2022Large Language Models are Few-Shot Clinical Information Extractorscited by 207
  9. 2021Hi-BEHRT: Hierarchical Transformer-based model for accurate prediction of clinical events using multimodal longitudinal electronic health recordscited by 54
  10. 2023A Comparative Study of Pretrained Language Models for Long Clinical Textcited by 35
  11. 2023Retrieving Evidence from EHRs with LLMs: Possibilities and Challengescited by 8

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