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3D-based RNA function prediction tools in rnaglib

arXiv 2402.09330 ↗First posted 14 Feb 2024q-bio.BM cs.LGcited by 0

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Abstract (arXiv)

Understanding the connection between complex structural features of RNA and biological function is a fundamental challenge in evolutionary studies and in RNA design. However, building datasets of RNA 3D structures and making appropriate modeling choices remains time-consuming and lacks standardization. In this chapter, we describe the use of rnaglib, to train supervised and unsupervised machine learning-based function prediction models on datasets of RNA 3D structures.

Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 2 of its 12 references that are in the map. First posted on arXiv 14 Feb 2024.

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References · 2

  1. 2017Representation Learning on Graphs: Methods and Applicationscited by 457
  2. 2020VeRNAl: Mining RNA Structures for Fuzzy Base Pairing Network Motifscited by 3

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