Simulation Based Bayesian Optimization
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Abstract (arXiv)
Bayesian Optimization (BO) is a powerful method for optimizing black-box functions by combining prior knowledge with ongoing function evaluations. BO constructs a probabilistic surrogate model of the objective function given the covariates, which is in turn used to inform the selection of future evaluation points through an acquisition function. For smooth continuous search spaces, Gaussian Processes (GPs) are commonly used as the surrogate model as they offer analytical access to posterior predictive distributions, thus facilitating the computation and optimization of acquisition functions. However, in complex scenarios involving optimization over categorical or mixed covariate spaces, GPs may not be ideal. This paper introduces Simulation Based Bayesian Optimization (SBBO) as a novel approach to optimizing acquisition functions that only requires sampling-based access to posterior predictive distributions. SBBO allows the use of surrogate probabilistic models tailored for combinatorial spaces with discrete variables. Any Bayesian model in which posterior inference is carried out through Markov chain Monte Carlo can be selected as the surrogate model in SBBO. We demonstrate empirically the effectiveness of SBBO using various choices of surrogate models in applications involving combinatorial optimization.
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References · 12
- 2016Automatic chemical design using a data-driven continuous representation of moleculescited by 762
- 2018A Tutorial on Bayesian Optimizationcited by 734
- 2019NGBoost: Natural Gradient Boosting for Probabilistic Predictioncited by 94
- 2019Combinatorial Bayesian Optimization using the Graph Cartesian Productcited by 78
- 2022Recent Advances in Bayesian Optimizationcited by 74
- 2017Dealing with Integer-valued Variables in Bayesian Optimization with Gaussian Processescited by 65
- 2018Bayesian Optimization of Combinatorial Structurescited by 64
- 2020BOSS: Bayesian Optimization over String Spacescited by 54
- 2021Combining Latent Space and Structured Kernels for Bayesian Optimization over Combinatorial Spacescited by 45
- 2023Bayesian Optimization over High-Dimensional Combinatorial Spaces via Dictionary-based Embeddingscited by 24
- 2020Gaussian Process Molecule Property Prediction with FlowMOcited by 18
- 2022Fourier Representations for Black-Box Optimization over Categorical Variablescited by 4
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