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Decoding Neuronal Networks: A Reservoir Computing Approach for Predicting Connectivity and Functionality

arXiv 2311.03131 ↗First posted 6 Nov 2023q-bio.QM cs.LG eess.SPcited by 0

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Abstract (arXiv)

In this study, we address the challenge of analyzing electrophysiological measurements in neuronal networks. Our computational model, based on the Reservoir Computing Network (RCN) architecture, deciphers spatio-temporal data obtained from electrophysiological measurements of neuronal cultures. By reconstructing the network structure on a macroscopic scale, we reveal the connectivity between neuronal units. Notably, our model outperforms common methods like Cross-Correlation and Transfer-Entropy in predicting the network's connectivity map. Furthermore, we experimentally validate its ability to forecast network responses to specific inputs, including localized optogenetic stimuli.

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References · 2

  1. 2017Linking connectivity, dynamics and computations in low-rank recurrent neural networkscited by 51
  2. 2017Connectivity Inference from Neural Recording Data: Challenges, Mathematical Bases and Research Directionscited by 12

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