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Automated Ensemble-Based Segmentation of Adult Brain Tumors: A Novel Approach Using the BraTS AFRICA Challenge Data

arXiv 2308.07214 ↗First posted 14 Aug 2023eess.IV cs.CVcited by 0

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Abstract (arXiv)

Brain tumors, particularly glioblastoma, continue to challenge medical diagnostics and treatments globally. This paper explores the application of deep learning to multi-modality magnetic resonance imaging (MRI) data for enhanced brain tumor segmentation precision in the Sub-Saharan Africa patient population. We introduce an ensemble method that comprises eleven unique variations based on three core architectures: UNet3D, ONet3D, SphereNet3D and modified loss functions. The study emphasizes the need for both age- and population-based segmentation models, to fully account for the complexities in the brain. Our findings reveal that the ensemble approach, combining different architectures, outperforms single models, leading to improved evaluation metrics. Specifically, the results exhibit Dice scores of 0.82, 0.82, and 0.87 for enhancing tumor, tumor core, and whole tumor labels respectively. These results underline the potential of tailored deep learning techniques in precisely segmenting brain tumors and lay groundwork for future work to fine-tune models and assess performance across different brain regions.

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References · 4

  1. 2018Brain Tumor Segmentation and Radiomics Survival Prediction: Contribution to the BRATS 2017 Challengecited by 56
  2. 2023The Brain Tumor Segmentation (BraTS) Challenge 2023: Glioma Segmentation in Sub-Saharan Africa Patient Population (BraTS-Africa)cited by 51
  3. 2022blob loss: instance imbalance aware loss functions for semantic segmentationcited by 18
  4. 2023Meta-Analysis of Transfer Learning for Segmentation of Brain Lesionscited by 3

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