Auto-HeG: Automated Graph Neural Network on Heterophilic Graphs
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Abstract (arXiv)
Graph neural architecture search (NAS) has gained popularity in automatically designing powerful graph neural networks (GNNs) with relieving human efforts. However, existing graph NAS methods mainly work under the homophily assumption and overlook another important graph property, i.e., heterophily, which exists widely in various real-world applications. To date, automated heterophilic graph learning with NAS is still a research blank to be filled in. Due to the complexity and variety of heterophilic graphs, the critical challenge of heterophilic graph NAS mainly lies in developing the heterophily-specific search space and strategy. Therefore, in this paper, we propose a novel automated graph neural network on heterophilic graphs, namely Auto-HeG, to automatically build heterophilic GNN models with expressive learning abilities. Specifically, Auto-HeG incorporates heterophily into all stages of automatic heterophilic graph learning, including search space design, supernet training, and architecture selection. Through the diverse message-passing scheme with joint micro-level and macro-level designs, we first build a comprehensive heterophilic GNN search space, enabling Auto-HeG to integrate complex and various heterophily of graphs. With a progressive supernet training strategy, we dynamically shrink the initial search space according to layer-wise variation of heterophily, resulting in a compact and efficient supernet. Taking a heterophily-aware distance criterion as the guidance, we conduct heterophilic architecture selection in the leave-one-out pattern, so that specialized and expressive heterophilic GNN architectures can be derived. Extensive experiments illustrate the superiority of Auto-HeG in developing excellent heterophilic GNNs to human-designed models and graph NAS models.
Key facts. Cited by 23 papers in the map (data through 7 Oct 2026). Builds on 44 of its 58 references that are in the map. First posted on arXiv 23 Feb 2023.
Builds on
44 of 58 references.
References · 44
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32 more
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Citing papers per year: 2023: 9; 2024: 5; 2025: 7; 2026: 2.
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- 2023A Survey on Graph Neural Networks for Time Series: Forecasting, Classification, Imputation, and Anomaly Detectioncited by 145
- 2023Structure-free Graph Condensation: From Large-scale Graphs to Condensed Graph-free Datacited by 71
- 2023Towards Self-Interpretable Graph-Level Anomaly Detectioncited by 41
- 2023Learning Strong Graph Neural Networks with Weak Informationcited by 25
- 2023Finding the Missing-half: Graph Complementary Learning for Homophily-prone and Heterophily-prone Graphscited by 25
- 2023GNNEvaluator: Evaluating GNN Performance On Unseen Graphs Without Labelscited by 17
- 2025Uncertainty-Aware Graph Neural Networks: A Multi-Hop Evidence Fusion Approachcited by 14
- 2024A Survey on Learning from Graphs with Heterophily: Recent Advances and Future Directionscited by 13
- 2024Online GNN Evaluation Under Test-time Graph Distribution Shiftscited by 12
- 2024Two Trades is not Baffled: Condensing Graph via Crafting Rational Gradient Matchingcited by 8
- 2024Optimizing Polynomial Graph Filters: A Novel Adaptive Krylov Subspace Approachcited by 5
- 2025Beyond Fixed Depth: Adaptive Graph Neural Networks for Node Classification Under Varying Homophilycited by 5
11 more
- 2025LLM4GNAS: A Large Language Model Based Toolkit for Graph Neural Architecture Searchcited by 3
- 2023CAT: A Causally Graph Attention Network for Trimming Heterophilic Graphcited by 2
- 2025Sheaf Graph Neural Networks via PAC-Bayes Spectral Optimizationcited by 2
- 2023Graph Neural Architecture Search with GPT-4cited by 1
- 2025Hierarchical Uncertainty-Aware Graph Neural Networkcited by 1
- 2025ABG-NAS: Adaptive Bayesian Genetic Neural Architecture Search for Graph Representation Learningcited by 1
- 2025Gauge-Equivariant Graph Networks via Self-Interference Cancellationcited by 1
- 2023Explainable Graph Neural Architecture Search via Monte-Carlo Tree Search (Full version)cited by 0
- 2024Better Not to Propagate: Understanding Edge Uncertainty and Over-smoothing in Signed Graph Neural Networkscited by 0
- 2026Persistent Tri-State Message Passingcited by 0
- 2026AutoHGNN: Robust and Efficient Neural Architecture Search for Hypergraph Neural Networkscited by 0
- 2026AutoHGNN: Robust and Efficient Neural Architecture Search for Hypergraph Neural Networks27 Sep 2026
- 2026Persistent Tri-State Message Passing3 Jan 2026
- 2025Gauge-Equivariant Graph Networks via Self-Interference Cancellation20 Nov 2025
- 2025Beyond Fixed Depth: Adaptive Graph Neural Networks for Node Classification Under Varying Homophily10 Nov 2025
- 2025Sheaf Graph Neural Networks via PAC-Bayes Spectral Optimization1 Aug 2025
- 2025Uncertainty-Aware Graph Neural Networks: A Multi-Hop Evidence Fusion Approach16 Jun 2025
- 2025ABG-NAS: Adaptive Bayesian Genetic Neural Architecture Search for Graph Representation Learning30 Apr 2025
- 2025Hierarchical Uncertainty-Aware Graph Neural Network28 Apr 2025
- 2025LLM4GNAS: A Large Language Model Based Toolkit for Graph Neural Architecture Search12 Feb 2025
- 2024Better Not to Propagate: Understanding Edge Uncertainty and Over-smoothing in Signed Graph Neural Networks9 Aug 2024
- 2024Online GNN Evaluation Under Test-time Graph Distribution Shifts15 Mar 2024
- 2024Optimizing Polynomial Graph Filters: A Novel Adaptive Krylov Subspace Approach12 Mar 2024
11 more
- 2024Two Trades is not Baffled: Condensing Graph via Crafting Rational Gradient Matching7 Feb 2024
- 2024A Survey on Learning from Graphs with Heterophily: Recent Advances and Future Directions18 Jan 2024
- 2023CAT: A Causally Graph Attention Network for Trimming Heterophilic Graph14 Dec 2023
- 2023Towards Self-Interpretable Graph-Level Anomaly Detection25 Oct 2023
- 2023GNNEvaluator: Evaluating GNN Performance On Unseen Graphs Without Labels23 Oct 2023
- 2023Graph Neural Architecture Search with GPT-430 Sep 2023
- 2023Explainable Graph Neural Architecture Search via Monte-Carlo Tree Search (Full version)30 Aug 2023
- 2023A Survey on Graph Neural Networks for Time Series: Forecasting, Classification, Imputation, and Anomaly Detection7 Jul 2023
- 2023Finding the Missing-half: Graph Complementary Learning for Homophily-prone and Heterophily-prone Graphs13 Jun 2023
- 2023Structure-free Graph Condensation: From Large-scale Graphs to Condensed Graph-free Data5 Jun 2023
- 2023Learning Strong Graph Neural Networks with Weak Information29 May 2023
- 2023A Survey on Graph Neural Networks for Time Series: Forecasting, Classification, Imputation, and Anomaly Detectioncited by 145
- 2023Structure-free Graph Condensation: From Large-scale Graphs to Condensed Graph-free Datacited by 71
- 2023Towards Self-Interpretable Graph-Level Anomaly Detectioncited by 41
- 2023Learning Strong Graph Neural Networks with Weak Informationcited by 25
- 2023Finding the Missing-half: Graph Complementary Learning for Homophily-prone and Heterophily-prone Graphscited by 25
- 2023GNNEvaluator: Evaluating GNN Performance On Unseen Graphs Without Labelscited by 17
- 2025Uncertainty-Aware Graph Neural Networks: A Multi-Hop Evidence Fusion Approachcited by 14
- 2024A Survey on Learning from Graphs with Heterophily: Recent Advances and Future Directionscited by 13
- 2024Online GNN Evaluation Under Test-time Graph Distribution Shiftscited by 12
- 2024Two Trades is not Baffled: Condensing Graph via Crafting Rational Gradient Matchingcited by 8
- 2024Optimizing Polynomial Graph Filters: A Novel Adaptive Krylov Subspace Approachcited by 5
- 2025Beyond Fixed Depth: Adaptive Graph Neural Networks for Node Classification Under Varying Homophilycited by 5
12 most cited of 23 All 23 (JSON)
- 2026AutoHGNN: Robust and Efficient Neural Architecture Search for Hypergraph Neural Networks27 Sep 2026
- 2026Persistent Tri-State Message Passing3 Jan 2026
- 2025Gauge-Equivariant Graph Networks via Self-Interference Cancellation20 Nov 2025
- 2025Beyond Fixed Depth: Adaptive Graph Neural Networks for Node Classification Under Varying Homophily10 Nov 2025
- 2025Sheaf Graph Neural Networks via PAC-Bayes Spectral Optimization1 Aug 2025
- 2025Uncertainty-Aware Graph Neural Networks: A Multi-Hop Evidence Fusion Approach16 Jun 2025
- 2025ABG-NAS: Adaptive Bayesian Genetic Neural Architecture Search for Graph Representation Learning30 Apr 2025
- 2025Hierarchical Uncertainty-Aware Graph Neural Network28 Apr 2025
- 2025LLM4GNAS: A Large Language Model Based Toolkit for Graph Neural Architecture Search12 Feb 2025
- 2024Better Not to Propagate: Understanding Edge Uncertainty and Over-smoothing in Signed Graph Neural Networks9 Aug 2024
- 2024Online GNN Evaluation Under Test-time Graph Distribution Shifts15 Mar 2024
- 2024Optimizing Polynomial Graph Filters: A Novel Adaptive Krylov Subspace Approach12 Mar 2024
12 newest of 23 All 23 (JSON)