Bayesian Additive Main Effects and Multiplicative Interaction Models using Tensor Regression for Multi-environmental Trials
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Abstract (arXiv)
We propose a Bayesian tensor regression model to accommodate the effect of multiple factors on phenotype prediction. We adopt a set of prior distributions that resolve identifiability issues that may arise between the parameters in the model. Further, we incorporate a spike-and-slab structure that identifies which interactions are relevant for inclusion in the linear predictor, even when they form a subset of the available variables. Simulation experiments show that our method outperforms previous related models and machine learning algorithms under different sample sizes and degrees of complexity. We further explore the applicability of our model by analysing real-world data related to wheat production across Ireland from 2010 to 2019. Our model performs competitively and overcomes key limitations found in other analogous approaches. Finally, we adapt a set of visualisations for the posterior distribution of the tensor effects that facilitate the identification of optimal interactions between the tensor variables, whilst accounting for the uncertainty in the posterior distribution.
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References · 6
- 2016Variational Inference: A Review for Statisticianscited by 1,466
- 2015Bayesian Tensor Regressioncited by 21
- 2019ISLET: Fast and Optimal Low-rank Tensor Regression via Importance Sketchingcited by 14
- 2018Probabilistic PARAFAC2cited by 2
- 2019Soft Tensor Regressioncited by 2
- 2022Variational Inference for Additive Main and Multiplicative Interaction Effects Modelscited by 1
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