mlsanityData to 7 Oct 2026

EPR-Net: Constructing non-equilibrium potential landscape via a variational force projection formulation

arXiv 2301.01946 ↗First posted 5 Jan 2023physics.bio-ph cond-mat.stat-mech cs.AIcited by 3

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Abstract (arXiv)

We present EPR-Net, a novel and effective deep learning approach that tackles a crucial challenge in biophysics: constructing potential landscapes for high-dimensional non-equilibrium steady-state (NESS) systems. EPR-Net leverages a nice mathematical fact that the desired negative potential gradient is simply the orthogonal projection of the driving force of the underlying dynamics in a weighted inner-product space. Remarkably, our loss function has an intimate connection with the steady entropy production rate (EPR), enabling simultaneous landscape construction and EPR estimation. We introduce an enhanced learning strategy for systems with small noise, and extend our framework to include dimensionality reduction and state-dependent diffusion coefficient case in a unified fashion. Comparative evaluations on benchmark problems demonstrate the superior accuracy, effectiveness, and robustness of EPR-Net compared to existing methods. We apply our approach to challenging biophysical problems, such as an 8D limit cycle and a 52D multi-stability problem, which provide accurate solutions and interesting insights on constructed landscapes. With its versatility and power, EPR-Net offers a promising solution for diverse landscape construction problems in biophysics.

Key facts. Cited by 3 papers in the map (data through 7 Oct 2026). Builds on 7 of its 64 references that are in the map. First posted on arXiv 5 Jan 2023.

Builds on

7 of 64 references.

References · 7

  1. 2019PyTorch: An Imperative Style, High-Performance Deep Learning Librarycited by 20,160
  2. 2019Generative Modeling by Estimating Gradients of the Data Distributioncited by 4,067
  3. 2019Neural Spline Flowscited by 590
  4. 2018A Mean Field View of the Landscape of Two-Layers Neural Networkscited by 463
  5. 2020Coarse Graining Molecular Dynamics with Graph Neural Networkscited by 56
  6. 2020A Data Driven Method for Computing Quasipotentialscited by 11
  7. 2021Computing the Invariant Distribution of Randomly Perturbed Dynamical Systems Using Deep Learningcited by 4

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Citing papers per year: 2024: 1; 2025: 2.

3 papers.