Bug Analysis in Jupyter Notebook Projects: An Empirical Study
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Abstract (arXiv)
Computational notebooks, such as Jupyter, have been widely adopted by data scientists to write code for analyzing and visualizing data. Despite their growing adoption and popularity, there has been no thorough study to understand Jupyter development challenges from the practitioners' point of view. This paper presents a systematic study of bugs and challenges that Jupyter practitioners face through a large-scale empirical investigation. We mined 14,740 commits from 105 GitHub open-source projects with Jupyter notebook code. Next, we analyzed 30,416 Stack Overflow posts which gave us insights into bugs that practitioners face when developing Jupyter notebook projects. Finally, we conducted nineteen interviews with data scientists to uncover more details about Jupyter bugs and to gain insights into Jupyter developers' challenges. We propose a bug taxonomy for Jupyter projects based on our results. We also highlight bug categories, their root causes, and the challenges that Jupyter practitioners face.
Key facts. Cited by 5 papers in the map (data through 14 Oct 2026). First posted on arXiv 13 Oct 2022.
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Citing papers per year: 2024: 2; 2025: 0; 2026: 3.
5 papers.
- 2024Do Current Language Models Support Code Intelligence for R Programming Language?cited by 4
- 2026Configuration Smells in AGENTS.md Files: Common Mistakes in Configuring Coding Agentscited by 1
- 2024Predicting the Understandability of Computational Notebooks through Code Metrics Analysiscited by 0
- 2026Data-aware Static Analysis: Improving Detection of Semantic Faults in Machine Learning Code Using Data Characteristicscited by 0
- 2026JupOtter: Cell-Level Bug Detection in Jupyter Notebookscited by 0
- 2026JupOtter: Cell-Level Bug Detection in Jupyter Notebooks22 Jun 2026
- 2026Configuration Smells in AGENTS.md Files: Common Mistakes in Configuring Coding Agents14 Jun 2026
- 2026Data-aware Static Analysis: Improving Detection of Semantic Faults in Machine Learning Code Using Data Characteristics8 Jun 2026
- 2024Do Current Language Models Support Code Intelligence for R Programming Language?10 Oct 2024
- 2024Predicting the Understandability of Computational Notebooks through Code Metrics Analysis16 Jun 2024