A Deep Learning-based Integrated Framework for Quality-aware Undersampled Cine Cardiac MRI Reconstruction and Analysis
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Abstract (arXiv)
Cine cardiac magnetic resonance (CMR) imaging is considered the gold standard for cardiac function evaluation. However, cine CMR acquisition is inherently slow and in recent decades considerable effort has been put into accelerating scan times without compromising image quality or the accuracy of derived results. In this paper, we present a fully-automated, quality-controlled integrated framework for reconstruction, segmentation and downstream analysis of undersampled cine CMR data. The framework enables active acquisition of radial k-space data, in which acquisition can be stopped as soon as acquired data are sufficient to produce high quality reconstructions and segmentations. This results in reduced scan times and automated analysis, enabling robust and accurate estimation of functional biomarkers. To demonstrate the feasibility of the proposed approach, we perform realistic simulations of radial k-space acquisitions on a dataset of subjects from the UK Biobank and present results on in-vivo cine CMR k-space data collected from healthy subjects. The results demonstrate that our method can produce quality-controlled images in a mean scan time reduced from 12 to 4 seconds per slice, and that image quality is sufficient to allow clinically relevant parameters to be automatically estimated to within 5% mean absolute difference.
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References · 13
- 2015Deep Residual Learning for Image Recognitioncited by 51,809
- 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,604
- 2017Learning a Variational Network for Reconstruction of Accelerated MRI Datacited by 340
- 2017A Deep Cascade of Convolutional Neural Networks for Dynamic MR Image Reconstructioncited by 231
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- 2018Deep Residual Learning for Accelerated MRI using Magnitude and Phase Networkscited by 53
- 2019Improving the generalizability of convolutional neural network-based segmentation on CMR imagescited by 25
- 2018Automatic CNN-based detection of cardiac MR motion artefacts using k-space data augmentation and curriculum learningcited by 21
- 2019Deep Learning Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentationcited by 17
- 2018A Machine-learning framework for automatic reference-free quality assessment in MRIcited by 10
- 2021Efficient Model Monitoring for Quality Control in Cardiac Image Segmentationcited by 6
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