Physics-informed neural networks to learn cardiac fiber orientation from multiple electroanatomical maps
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Abstract (arXiv)
We propose FiberNet, a method to estimate in-vivo the cardiac fiber architecture of the human atria from multiple catheter recordings of the electrical activation. Cardiac fibers play a central role in the electro-mechanical function of the heart, yet they are difficult to determine in-vivo, and hence rarely truly patient-specific in existing cardiac models. FiberNet learns the fiber arrangement by solving an inverse problem with physics-informed neural networks. The inverse problem amounts to identifying the conduction velocity tensor of a cardiac propagation model from a set of sparse activation maps. The use of multiple maps enables the simultaneous identification of all the components of the conduction velocity tensor, including the local fiber angle. We extensively test FiberNet on synthetic 2-D and 3-D examples, diffusion tensor fibers, and a patient-specific case. We show that 3 maps are sufficient to accurately capture the fibers, also in the presence of noise. With fewer maps, the role of regularization becomes prominent. Moreover, we show that the fitted model can robustly reproduce unseen activation maps. We envision that FiberNet will help the creation of patient-specific models for personalized medicine. The full code is available at http://github.com/fsahli/FiberNet.
Key facts. Cited by 14 papers in the map (data through 7 Oct 2026). Builds on 9 of its 53 references that are in the map. First posted on arXiv 28 Jan 2022.
Builds on
9 of 53 references.
References · 9
- 2014Adam: A Method for Stochastic Optimizationcited by 36,960
- 2020On the eigenvector bias of Fourier feature networks: From regression to solving multi-scale PDEs with physics-informed neural networkscited by 279
- 2019Fast Tetrahedral Meshing in the Wildcited by 35
- 2018The Vector Heat Methodcited by 31
- 2020Gaussian Process Manifold Interpolation for Probabilistic Atrial Activation Maps and Uncertain Conduction Velocitycited by 13
- 2020Exploring the potential of transfer learning for metamodels of heterogeneous material deformationcited by 9
- 2021Learning atrial fiber orientations and conductivity tensors from intracardiac maps using physics-informed neural networkscited by 8
- 2021Modeling cardiac muscle fibers in ventricular and atrial electrophysiology simulationscited by 6
- 2020PIEMAP: Personalized Inverse Eikonal Model from cardiac Electro-Anatomical Mapscited by 4
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Citing papers per year: 2022: 3; 2023: 6; 2024: 1; 2025: 3; 2026: 1.
14 papers.
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- 2024From PINNs to PIKANs: Recent Advances in Physics-Informed Machine Learningcited by 73
- 2022Delta-PINNs: physics-informed neural networks on complex geometriescited by 28
- 2023Towards Enabling Cardiac Digital Twins of Myocardial Infarction Using Deep Computational Models for Inverse Inferencecited by 18
- 2023Physics-informed Neural Network Estimation of Material Properties in Soft Tissue Nonlinear Biomechanical Modelscited by 11
- 2023Shape of my heart: Cardiac models through learned signed distance functionscited by 10
- 2025Evolutionary Optimization of Physics-Informed Neural Networks: Evo-PINN Frontiers and Opportunitiescited by 10
- 2023Digital twinning of cardiac electrophysiology models from the surface ECG: a geodesic backpropagation approachcited by 5
- 2025Physics-Informed Machine Learning in Biomedical Science and Engineeringcited by 4
- 2022Utilising physics-guided deep learning to overcome data scarcitycited by 1
- 2022Estimation of fibre architecture and scar in myocardial tissue using electrograms: an in-silico studycited by 1
- 2023Physics-informed neural networks for blood flow inverse problemscited by 0
- 2023Going Deeper with Five-point Stencil Convolutions for Reaction-Diffusion Equationscited by 0
- 2026HAPI-EP: Towards Hybrid, Adaptive, and Predictive Digital Twins of Cardiac Electrophysiology14 Jun 2026
- 2025Physics-Informed Machine Learning in Biomedical Science and Engineering6 Oct 2025
- 2025WarpPINN-fibers: improved cardiac strain estimation from cine-MR with physics-informed neural networks10 Sep 2025
- 2025Evolutionary Optimization of Physics-Informed Neural Networks: Evo-PINN Frontiers and Opportunities11 Jan 2025
- 2024From PINNs to PIKANs: Recent Advances in Physics-Informed Machine Learning17 Oct 2024
- 2023Physics-informed Neural Network Estimation of Material Properties in Soft Tissue Nonlinear Biomechanical Models15 Dec 2023
- 2023Shape of my heart: Cardiac models through learned signed distance functions31 Aug 2023
- 2023Digital twinning of cardiac electrophysiology models from the surface ECG: a geodesic backpropagation approach16 Aug 2023
- 2023Going Deeper with Five-point Stencil Convolutions for Reaction-Diffusion Equations9 Aug 2023
- 2023Physics-informed neural networks for blood flow inverse problems2 Aug 2023
- 2023Towards Enabling Cardiac Digital Twins of Myocardial Infarction Using Deep Computational Models for Inverse Inference10 Jul 2023
- 2022Estimation of fibre architecture and scar in myocardial tissue using electrograms: an in-silico study6 Dec 2022
2 more
- 2024From PINNs to PIKANs: Recent Advances in Physics-Informed Machine Learningcited by 73
- 2022Delta-PINNs: physics-informed neural networks on complex geometriescited by 28
- 2023Towards Enabling Cardiac Digital Twins of Myocardial Infarction Using Deep Computational Models for Inverse Inferencecited by 18
- 2023Physics-informed Neural Network Estimation of Material Properties in Soft Tissue Nonlinear Biomechanical Modelscited by 11
- 2023Shape of my heart: Cardiac models through learned signed distance functionscited by 10
- 2025Evolutionary Optimization of Physics-Informed Neural Networks: Evo-PINN Frontiers and Opportunitiescited by 10
- 2023Digital twinning of cardiac electrophysiology models from the surface ECG: a geodesic backpropagation approachcited by 5
- 2025Physics-Informed Machine Learning in Biomedical Science and Engineeringcited by 4
- 2022Utilising physics-guided deep learning to overcome data scarcitycited by 1
- 2022Estimation of fibre architecture and scar in myocardial tissue using electrograms: an in-silico studycited by 1
- 2023Physics-informed neural networks for blood flow inverse problemscited by 0
- 2023Going Deeper with Five-point Stencil Convolutions for Reaction-Diffusion Equationscited by 0
12 most cited of 14 All 14 (JSON)
- 2026HAPI-EP: Towards Hybrid, Adaptive, and Predictive Digital Twins of Cardiac Electrophysiology14 Jun 2026
- 2025Physics-Informed Machine Learning in Biomedical Science and Engineering6 Oct 2025
- 2025WarpPINN-fibers: improved cardiac strain estimation from cine-MR with physics-informed neural networks10 Sep 2025
- 2025Evolutionary Optimization of Physics-Informed Neural Networks: Evo-PINN Frontiers and Opportunities11 Jan 2025
- 2024From PINNs to PIKANs: Recent Advances in Physics-Informed Machine Learning17 Oct 2024
- 2023Physics-informed Neural Network Estimation of Material Properties in Soft Tissue Nonlinear Biomechanical Models15 Dec 2023
- 2023Shape of my heart: Cardiac models through learned signed distance functions31 Aug 2023
- 2023Digital twinning of cardiac electrophysiology models from the surface ECG: a geodesic backpropagation approach16 Aug 2023
- 2023Going Deeper with Five-point Stencil Convolutions for Reaction-Diffusion Equations9 Aug 2023
- 2023Physics-informed neural networks for blood flow inverse problems2 Aug 2023
- 2023Towards Enabling Cardiac Digital Twins of Myocardial Infarction Using Deep Computational Models for Inverse Inference10 Jul 2023
- 2022Estimation of fibre architecture and scar in myocardial tissue using electrograms: an in-silico study6 Dec 2022
12 newest of 14 All 14 (JSON)