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DAGSurv: Directed Acyclic Graph Based Survival Analysis Using Deep Neural Networks

arXiv 2111.01482 ↗First posted 2 Nov 2021cs.LG stat.MLcited by 0

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Abstract (arXiv)

Causal structures for observational survival data provide crucial information regarding the relationships between covariates and time-to-event. We derive motivation from the information theoretic source coding argument, and show that incorporating the knowledge of the directed acyclic graph (DAG) can be beneficial if suitable source encoders are employed. As a possible source encoder in this context, we derive a variational inference based conditional variational autoencoder for causal structured survival prediction, which we refer to as DAGSurv. We illustrate the performance of DAGSurv on low and high-dimensional synthetic datasets, and real-world datasets such as METABRIC and GBSG. We demonstrate that the proposed method outperforms other survival analysis baselines such as Cox Proportional Hazards, DeepSurv and Deephit, which are oblivious to the underlying causal relationship between data entities.

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References · 11

  1. 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
  2. 2019An Introduction to Variational Autoencoderscited by 997
  3. 2016DeepSurv: Personalized Treatment Recommender System Using A Cox Proportional Hazards Deep Neural Networkcited by 354
  4. 2019DAG-GNN: DAG Structure Learning with Graph Neural Networkscited by 329
  5. 2015A Review of Relational Machine Learning for Knowledge Graphscited by 264
  6. 2019Time-to-Event Prediction with Neural Networks and Cox Regressioncited by 173
  7. 2017Machine Learning for Survival Analysis: A Surveycited by 112
  8. 2018Inference in Probabilistic Graphical Models by Graph Neural Networkscited by 38
  9. 2016Gaussian Processes for Survival Analysiscited by 14
  10. 2020CAMTA: Causal Attention Model for Multi-touch Attributioncited by 12
  11. 2014Data mining for censored time-to-event data: A Bayesian network model for predicting cardiovascular risk from electronic health record datacited by 4

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