Scalable Bayesian computation for crossed and nested hierarchical models
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Abstract (arXiv)
We develop sampling algorithms to fit Bayesian hierarchical models, the computational complexity of which scales linearly with the number of observations and the number of parameters in the model. We focus on crossed random effect and nested multilevel models, which are used ubiquitously in applied sciences. The posterior dependence in both classes is sparse: in crossed random effects models it resembles a random graph, whereas in nested multilevel models it is tree-structured. For each class we identify a framework for scalable computation, building on previous work. Methods for crossed models are based on extensions of appropriately designed collapsed Gibbs samplers, where we introduce the idea of local centering; while methods for nested models are based on sparse linear algebra and data augmentation. We provide a theoretical analysis of the proposed algorithms in some simplified settings, including a comparison with previously proposed methodologies and an average-case analysis based on random graph theory. Numerical experiments, including two challenging real data analyses on predicting electoral results and real estate prices, compare with off-the-shelf Hamiltonian Monte Carlo, displaying drastic improvement in performance.
Key facts. Cited by 9 papers in the map (data through 7 Oct 2026). First posted on arXiv 19 Mar 2021.
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Citing papers per year: 2023: 2; 2024: 6; 2025: 1.
9 papers.
- 2024Entropy contraction of the Gibbs sampler under log-concavitycited by 12
- 2023Partially factorized variational inference for high-dimensional mixed modelscited by 10
- 2023Dimension-free mixing times of Gibbs samplers for Bayesian hierarchical modelscited by 4
- 2024Scalability of Metropolis-within-Gibbs schemes for high-dimensional Bayesian modelscited by 4
- 2024Linear-cost unbiased posterior estimates for crossed effects and matrix factorization models via couplingscited by 2
- 2024Conjugate gradient methods for high-dimensional GLMMscited by 2
- 2024Scalable and Calibrated Sampling for Bayesian Generalized Linear Mixed Model via Stochastic Gradient Markov Chain Monte Carlocited by 1
- 2024Hamiltonian Monte Carlo Inference of Marginalized Linear Mixed-Effects Modelscited by 1
- 2025Scalable Krylov Subspace Methods for Generalized Mixed-Effects Models with Crossed Random Effectscited by 0
- 2025Scalable Krylov Subspace Methods for Generalized Mixed-Effects Models with Crossed Random Effects14 May 2025
- 2024Conjugate gradient methods for high-dimensional GLMMs7 Nov 2024
- 2024Hamiltonian Monte Carlo Inference of Marginalized Linear Mixed-Effects Models31 Oct 2024
- 2024Linear-cost unbiased posterior estimates for crossed effects and matrix factorization models via couplings11 Oct 2024
- 2024Entropy contraction of the Gibbs sampler under log-concavity1 Oct 2024
- 2024Scalability of Metropolis-within-Gibbs schemes for high-dimensional Bayesian models14 Mar 2024
- 2024Scalable and Calibrated Sampling for Bayesian Generalized Linear Mixed Model via Stochastic Gradient Markov Chain Monte Carlo5 Mar 2024
- 2023Partially factorized variational inference for high-dimensional mixed models20 Dec 2023
- 2023Dimension-free mixing times of Gibbs samplers for Bayesian hierarchical models14 Apr 2023