mlsanityData to 7 Oct 2026

Autonomous discovery in the chemical sciences part II: Outlook

arXiv 2003.13755 ↗First posted 30 Mar 2020q-bio.QM cs.AI cs.ROcited by 26

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Abstract (arXiv)

This two-part review examines how automation has contributed to different aspects of discovery in the chemical sciences. In this second part, we reflect on a selection of exemplary studies. It is increasingly important to articulate what the role of automation and computation has been in the scientific process and how that has or has not accelerated discovery. One can argue that even the best automated systems have yet to ``discover'' despite being incredibly useful as laboratory assistants. We must carefully consider how they have been and can be applied to future problems of chemical discovery in order to effectively design and interact with future autonomous platforms. The majority of this article defines a large set of open research directions, including improving our ability to work with complex data, build empirical models, automate both physical and computational experiments for validation, select experiments, and evaluate whether we are making progress toward the ultimate goal of autonomous discovery. Addressing these practical and methodological challenges will greatly advance the extent to which autonomous systems can make meaningful discoveries.

Key facts. Cited by 26 papers in the map (data through 7 Oct 2026). First posted on arXiv 30 Mar 2020.

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Citing papers per year: 2021: 8; 2022: 8; 2023: 2; 2024: 5; 2025: 0; 2026: 3.

26 papers.

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  1. 2021Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Developmentcited by 258
  2. 2022Accelerating Bayesian Optimization for Biological Sequence Design with Denoising Autoencoderscited by 99
  3. 2022Local Latent Space Bayesian Optimization over Structured Inputscited by 78
  4. 2021Amortized Tree Generation for Bottom-up Synthesis Planning and Synthesizable Molecular Designcited by 44
  5. 2021DOCKSTRING: easy molecular docking yields better benchmarks for ligand designcited by 33
  6. 2022Quantum Machine Learning Framework for Virtual Screening in Drug Discovery: a Prospective Quantum Advantagecited by 18
  7. 2024Generative Artificial Intelligence for Navigating Synthesizable Chemical Spacecited by 18
  8. 2022Bayesian optimization with known experimental and design constraints for chemistry applicationscited by 11
  9. 2022Improving Small Molecule Generation using Mutual Information Machinecited by 10
  10. 2026Agentic AI Scientists Are Not Built For Autonomous Scientific Discoverycited by 7
  11. 2021Golem: An algorithm for robust experiment and process optimizationcited by 6
  12. 2024Procedural Synthesis of Synthesizable Moleculescited by 6
14 more
  1. 2021Towards Futuristic Autonomous Experimentation--A Surprise-Reacting Sequential Experiment Policycited by 4
  2. 2022Synthetic data enable experiments in atomistic machine learningcited by 3
  3. 2026The AnIML Ontology: Enabling Semantic Interoperability for Large-Scale Experimental Data in Interconnected Scientific Labscited by 3
  4. 2021Gemini: Dynamic Bias Correction for Autonomous Experimentation and Molecular Simulationcited by 2
  5. 2022Autonomous Drug Design with Multi-Armed Banditscited by 2
  6. 2024MFBind: a Multi-Fidelity Approach for Evaluating Drug Compounds in Practical Generative Modelingcited by 2
  7. 2024Advancing Extrapolative Predictions of Material Properties through Learning to Learncited by 2
  8. 2021An In-depth Summary of Recent Artificial Intelligence Applications in Drug Designcited by 1
  9. 2022Active Learning Exploration of Transition Metal Complexes to Discover Method-Insensitive and Synthetically Accessible Chromophorescited by 1
  10. 2023Domain-agnostic and Multi-level Evaluation of Generative Modelscited by 1
  11. 2023Speculative Exploration on the Concept of Artificial Agents Conducting Autonomous Researchcited by 1
  12. 2024MF-LAL: Drug Compound Generation Using Multi-Fidelity Latent Space Active Learningcited by 1
  13. 2021Toward Building Science Discovery Machinescited by 0
  14. 2026Generic Vision and Cross-Attention for Reaction Yield Predictioncited by 0