Estimating Descriptors for Large Graphs
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Abstract (arXiv)
Embedding networks into a fixed dimensional feature space, while preserving its essential structural properties is a fundamental task in graph analytics. These feature vectors (graph descriptors) are used to measure the pairwise similarity between graphs. This enables applying data mining algorithms (e.g classification, clustering, or anomaly detection) on graph-structured data which have numerous applications in multiple domains. State-of-the-art algorithms for computing descriptors require the entire graph to be in memory, entailing a huge memory footprint, and thus do not scale well to increasing sizes of real-world networks. In this work, we propose streaming algorithms to efficiently approximate descriptors by estimating counts of sub-graphs of order k≤ 4, and thereby devise extensions of two existing graph comparison paradigms: the Graphlet Kernel and NetSimile. Our algorithms require a single scan over the edge stream, have space complexity that is a fraction of the input size, and approximate embeddings via a simple sampling scheme. Our design exploits the trade-off between available memory and estimation accuracy to provide a method that works well for limited memory requirements. We perform extensive experiments on real-world networks and demonstrate that our algorithms scale well to massive graphs.
Key facts. Cited by 7 papers in the map (data through 7 Oct 2026). First posted on arXiv 28 Jan 2020.
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Citing papers per year: 2021: 6; 2022: 1.
7 papers.
- 2021Spike2Vec: An Efficient and Scalable Embedding Approach for COVID-19 Spike Sequencescited by 30
- 2021A k-mer Based Approach for SARS-CoV-2 Variant Identificationcited by 23
- 2021Effective and scalable clustering of SARS-CoV-2 sequencescited by 15
- 2021Robust Representation and Efficient Feature Selection Allows for Effective Clustering of SARS-CoV-2 Variantscited by 14
- 2021Computing Graph Descriptors on Edge Streamscited by 4
- 2021Characterizing SARS-CoV-2 Spike Sequences Based on Geographical Locationcited by 2
- 2022Information We Can Extract About a User From 'One Minute Mobile Application Usage'cited by 1
- 2022Information We Can Extract About a User From 'One Minute Mobile Application Usage'27 Jul 2022
- 2021Robust Representation and Efficient Feature Selection Allows for Effective Clustering of SARS-CoV-2 Variants18 Oct 2021
- 2021Characterizing SARS-CoV-2 Spike Sequences Based on Geographical Location2 Oct 2021
- 2021Spike2Vec: An Efficient and Scalable Embedding Approach for COVID-19 Spike Sequences12 Sep 2021
- 2021Computing Graph Descriptors on Edge Streams2 Sep 2021
- 2021Effective and scalable clustering of SARS-CoV-2 sequences18 Aug 2021
- 2021A k-mer Based Approach for SARS-CoV-2 Variant Identification7 Aug 2021