Probability Calibration for Knowledge Graph Embedding Models
Not on the map. Why?
Abstract (arXiv)
Knowledge graph embedding research has overlooked the problem of probability calibration. We show popular embedding models are indeed uncalibrated. That means probability estimates associated to predicted triples are unreliable. We present a novel method to calibrate a model when ground truth negatives are not available, which is the usual case in knowledge graphs. We propose to use Platt scaling and isotonic regression alongside our method. Experiments on three datasets with ground truth negatives show our contribution leads to well-calibrated models when compared to the gold standard of using negatives. We get significantly better results than the uncalibrated models from all calibration methods. We show isotonic regression offers the best the performance overall, not without trade-offs. We also show that calibrated models reach state-of-the-art accuracy without the need to define relation-specific decision thresholds.
Key facts. Cited by 20 papers in the map (data through 7 Oct 2026). First posted on arXiv 20 Dec 2019.
Builds on
No reference list yet.
Built on by
Citing papers per year: 2021: 2; 2022: 6; 2023: 6; 2024: 2; 2025: 3; 2026: 1.
20 papers.
Sort:
By area:
- 2022Knowledge Graph Embedding: A Survey from the Perspective of Representation Spacescited by 41
- 2023How to Turn Your Knowledge Graph Embeddings into Generative Modelscited by 20
- 2023Adapting Neural Link Predictors for Data-Efficient Complex Query Answeringcited by 13
- 2021Membership Inference Attacks on Knowledge Graphscited by 11
- 2021Bilinear Scoring Function Search for Knowledge Graph Learningcited by 11
- 2024Predictive Multiplicity of Knowledge Graph Embeddings in Link Predictioncited by 9
- 2025Certainty in Uncertainty: Reasoning over Uncertain Knowledge Graphs with Statistical Guaranteescited by 9
- 2022Swift and Sure: Hardness-aware Contrastive Learning for Low-dimensional Knowledge Graph Embeddingscited by 8
- 2022Stay Positive: Knowledge Graph Embedding Without Negative Samplingcited by 5
- 2024Conformalized Answer Set Prediction for Knowledge Graph Embeddingcited by 5
- 2025Predicate-Conditional Conformalized Answer Sets for Knowledge Graph Embeddingscited by 4
- 2022Kronecker Decomposition for Knowledge Graph Embeddingscited by 2
8 more
- 2022Explaining Link Predictions in Knowledge Graph Embedding Models with Influential Examplescited by 2
- 2023Can Persistent Homology provide an efficient alternative for Evaluation of Knowledge Graph Completion Methods?cited by 1
- 2023Perception and Semantic Aware Regularization for Sequential Confidence Calibrationcited by 1
- 2022Generalized Reciprocal Perspectivecited by 0
- 2023Causal Intervention for Measuring Confidence in Drug-Target Interaction Predictioncited by 0
- 2023PDPK: A Framework to Synthesise Process Data and Corresponding Procedural Knowledge for Manufacturingcited by 0
- 2025Lightweight Inference-Time Personalization for Frozen Knowledge Graph Embeddingscited by 0
- 2026A hierarchy of faithfulness criteria for knowledge base completioncited by 0
- 2026A hierarchy of faithfulness criteria for knowledge base completion20 Aug 2026
- 2025Lightweight Inference-Time Personalization for Frozen Knowledge Graph Embeddings26 Dec 2025
- 2025Certainty in Uncertainty: Reasoning over Uncertain Knowledge Graphs with Statistical Guarantees18 Oct 2025
- 2025Predicate-Conditional Conformalized Answer Sets for Knowledge Graph Embeddings22 May 2025
- 2024Conformalized Answer Set Prediction for Knowledge Graph Embedding15 Aug 2024
- 2024Predictive Multiplicity of Knowledge Graph Embeddings in Link Prediction15 Aug 2024
- 2023PDPK: A Framework to Synthesise Process Data and Corresponding Procedural Knowledge for Manufacturing16 Aug 2023
- 2023Causal Intervention for Measuring Confidence in Drug-Target Interaction Prediction31 May 2023
- 2023Perception and Semantic Aware Regularization for Sequential Confidence Calibration31 May 2023
- 2023How to Turn Your Knowledge Graph Embeddings into Generative Models25 May 2023
- 2023Can Persistent Homology provide an efficient alternative for Evaluation of Knowledge Graph Completion Methods?30 Jan 2023
- 2023Adapting Neural Link Predictors for Data-Efficient Complex Query Answering29 Jan 2023
8 more
- 2022Explaining Link Predictions in Knowledge Graph Embedding Models with Influential Examples5 Dec 2022
- 2022Knowledge Graph Embedding: A Survey from the Perspective of Representation Spaces7 Nov 2022
- 2022Generalized Reciprocal Perspective20 Oct 2022
- 2022Kronecker Decomposition for Knowledge Graph Embeddings13 May 2022
- 2022Stay Positive: Knowledge Graph Embedding Without Negative Sampling7 Jan 2022
- 2022Swift and Sure: Hardness-aware Contrastive Learning for Low-dimensional Knowledge Graph Embeddings3 Jan 2022
- 2021Bilinear Scoring Function Search for Knowledge Graph Learning1 Jul 2021
- 2021Membership Inference Attacks on Knowledge Graphs16 Apr 2021
- 2021Membership Inference Attacks on Knowledge Graphscited by 11
- 2021Membership Inference Attacks on Knowledge Graphs16 Apr 2021
- 2022Knowledge Graph Embedding: A Survey from the Perspective of Representation Spacescited by 41
- 2023How to Turn Your Knowledge Graph Embeddings into Generative Modelscited by 20
- 2023Adapting Neural Link Predictors for Data-Efficient Complex Query Answeringcited by 13
- 2021Bilinear Scoring Function Search for Knowledge Graph Learningcited by 11
- 2024Predictive Multiplicity of Knowledge Graph Embeddings in Link Predictioncited by 9
- 2025Certainty in Uncertainty: Reasoning over Uncertain Knowledge Graphs with Statistical Guaranteescited by 9
- 2022Swift and Sure: Hardness-aware Contrastive Learning for Low-dimensional Knowledge Graph Embeddingscited by 8
- 2022Stay Positive: Knowledge Graph Embedding Without Negative Samplingcited by 5
- 2025Predicate-Conditional Conformalized Answer Sets for Knowledge Graph Embeddingscited by 4
- 2022Kronecker Decomposition for Knowledge Graph Embeddingscited by 2
- 2022Explaining Link Predictions in Knowledge Graph Embedding Models with Influential Examplescited by 2
- 2023Can Persistent Homology provide an efficient alternative for Evaluation of Knowledge Graph Completion Methods?cited by 1
12 most cited of 18 All 18 (JSON)
- 2026A hierarchy of faithfulness criteria for knowledge base completion20 Aug 2026
- 2025Lightweight Inference-Time Personalization for Frozen Knowledge Graph Embeddings26 Dec 2025
- 2025Certainty in Uncertainty: Reasoning over Uncertain Knowledge Graphs with Statistical Guarantees18 Oct 2025
- 2025Predicate-Conditional Conformalized Answer Sets for Knowledge Graph Embeddings22 May 2025
- 2024Predictive Multiplicity of Knowledge Graph Embeddings in Link Prediction15 Aug 2024
- 2023PDPK: A Framework to Synthesise Process Data and Corresponding Procedural Knowledge for Manufacturing16 Aug 2023
- 2023Causal Intervention for Measuring Confidence in Drug-Target Interaction Prediction31 May 2023
- 2023Perception and Semantic Aware Regularization for Sequential Confidence Calibration31 May 2023
- 2023How to Turn Your Knowledge Graph Embeddings into Generative Models25 May 2023
- 2023Can Persistent Homology provide an efficient alternative for Evaluation of Knowledge Graph Completion Methods?30 Jan 2023
- 2023Adapting Neural Link Predictors for Data-Efficient Complex Query Answering29 Jan 2023
- 2022Explaining Link Predictions in Knowledge Graph Embedding Models with Influential Examples5 Dec 2022
12 newest of 18 All 18 (JSON)