Solving Bayesian Inverse Problems via Variational Autoencoders
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Abstract (arXiv)
In recent years, the field of machine learning has made phenomenal progress in the pursuit of simulating real-world data generation processes. One notable example of such success is the variational autoencoder (VAE). In this work, with a small shift in perspective, we leverage and adapt VAEs for a different purpose: uncertainty quantification in scientific inverse problems. We introduce UQ-VAE: a flexible, adaptive, hybrid data/model-informed framework for training neural networks capable of rapid modelling of the posterior distribution representing the unknown parameter of interest. Specifically, from divergence-based variational inference, our framework is derived such that most of the information usually present in scientific inverse problems is fully utilized in the training procedure. Additionally, this framework includes an adjustable hyperparameter that allows selection of the notion of distance between the posterior model and the target distribution. This introduces more flexibility in controlling how optimization directs the learning of the posterior model. Further, this framework possesses an inherent adaptive optimization property that emerges through the learning of the posterior uncertainty.
Key facts. Cited by 32 papers in the map (data through 14 Oct 2026). First posted on arXiv 5 Dec 2019.
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Citing papers per year: 2021: 1; 2022: 3; 2023: 6; 2024: 7; 2025: 9; 2026: 6.
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- 2024Neural Methods for Amortized Inferencecited by 39
- 2021Solution of Physics-based Bayesian Inverse Problems with Deep Generative Priorscited by 29
- 2022The efficacy and generalizability of conditional GANs for posterior inference in physics-based inverse problemscited by 15
- 2023InVAErt networks: a data-driven framework for model synthesis and identifiability analysiscited by 6
- 2024Paired Autoencoders for Likelihood-free Estimation in Inverse Problemscited by 6
- 2022Utilizing variational autoencoders in the Bayesian inverse problem of photoacoustic tomographycited by 5
- 2022Phi-DVAE: Physics-Informed Dynamical Variational Autoencoders for Unstructured Data Assimilationcited by 5
- 2023Quantifying uncertainty for deep learning based forecasting and flow-reconstruction using neural architecture search ensemblescited by 5
- 2025Good Things Come in Pairs: Paired Autoencoders for Inverse Problemscited by 5
- 2023Variational Bayes image restoration with compressive autoencoderscited by 4
- 2024A Primer on Variational Inference for Physics-Informed Deep Generative Modellingcited by 3
- 2025Generative AI for Autonomous Driving: A Reviewcited by 3
20 more
- 2025Adversarial Disentanglement by Backpropagation with Physics-Informed Variational Autoencodercited by 2
- 2025An invertible generative model for forward and inverse problemscited by 2
- 2023Dimension-reduced KRnet maps for high-dimensional Bayesian inverse problemscited by 1
- 2023An autoencoder compression approach for accelerating large-scale inverse problemscited by 1
- 2023Goal-oriented Uncertainty Quantification for Inverse Problems via Variational Encoder-Decoder Networkscited by 1
- 2024Learning WENO for entropy stable schemes to solve conservation lawscited by 1
- 2024Bi-level Guided Diffusion Models for Zero-Shot Medical Imaging Inverse Problemscited by 1
- 2024Diffusion assisted image reconstruction in optoacoustic tomographycited by 1
- 2024Integrating Physics of the Problem into Data-Driven Methods to Enhance Elastic Full-Waveform Inversion with Uncertainty Quantificationcited by 1
- 2025Bayesian Inverse Problems Meet Flow Matching: Efficient and Flexible Inference via Transformerscited by 1
- 2025Geometric Autoencoder Priors for Bayesian Inversion: Learn First Observe Latercited by 1
- 2026LLM-Based Test Oracles: Source-of-Authority Taxonomy -- A Systematic Literature Reviewcited by 1
- 2025Enhanced uncertainty quantification variational autoencoders for the solution of Bayesian inverse problemscited by 0
- 2025Optimal Linear Baseline Models for Scientific Machine Learningcited by 0
- 2025Diffusion for Fusion: Designing Stellarators with Generative AIcited by 0
- 2026Variational Sparse Paired Autoencoders (vsPAIR) for Inverse Problems and Uncertainty Quantificationcited by 0
- 2026Multiparameter Uncertainty Mapping in Quantitative Molecular MRI using a Physics-Structured Variational Autoencoder (PS-VAE)cited by 0
- 2026UOTIP: Unbalanced Optimal Transport Map for Unpaired Inverse Problemscited by 0
- 2026Deep Adaptive Dimension Reduction for Bayesian Inference in Inverse Problemscited by 0
- 2026A Multi-stage Constrained Optimization Framework for Data-driven Problemscited by 0
- 2026A Multi-stage Constrained Optimization Framework for Data-driven Problems26 Jul 2026
- 2026LLM-Based Test Oracles: Source-of-Authority Taxonomy -- A Systematic Literature Review6 Jul 2026
- 2026Deep Adaptive Dimension Reduction for Bayesian Inference in Inverse Problems28 May 2026
- 2026UOTIP: Unbalanced Optimal Transport Map for Unpaired Inverse Problems20 May 2026
- 2026Multiparameter Uncertainty Mapping in Quantitative Molecular MRI using a Physics-Structured Variational Autoencoder (PS-VAE)3 Feb 2026
- 2026Variational Sparse Paired Autoencoders (vsPAIR) for Inverse Problems and Uncertainty Quantification3 Feb 2026
- 2025Diffusion for Fusion: Designing Stellarators with Generative AI25 Nov 2025
- 2025Geometric Autoencoder Priors for Bayesian Inversion: Learn First Observe Later24 Sep 2025
- 2025An invertible generative model for forward and inverse problems4 Sep 2025
- 2025Optimal Linear Baseline Models for Scientific Machine Learning7 Aug 2025
- 2025Adversarial Disentanglement by Backpropagation with Physics-Informed Variational Autoencoder16 Jun 2025
- 2025Generative AI for Autonomous Driving: A Review21 May 2025
20 more
- 2025Good Things Come in Pairs: Paired Autoencoders for Inverse Problems10 May 2025
- 2025Bayesian Inverse Problems Meet Flow Matching: Efficient and Flexible Inference via Transformers3 Mar 2025
- 2025Enhanced uncertainty quantification variational autoencoders for the solution of Bayesian inverse problems18 Feb 2025
- 2024A Primer on Variational Inference for Physics-Informed Deep Generative Modelling10 Sep 2024
- 2024Integrating Physics of the Problem into Data-Driven Methods to Enhance Elastic Full-Waveform Inversion with Uncertainty Quantification4 Jun 2024
- 2024Paired Autoencoders for Likelihood-free Estimation in Inverse Problems21 May 2024
- 2024Neural Methods for Amortized Inference18 Apr 2024
- 2024Diffusion assisted image reconstruction in optoacoustic tomography16 Apr 2024
- 2024Bi-level Guided Diffusion Models for Zero-Shot Medical Imaging Inverse Problems4 Apr 2024
- 2024Learning WENO for entropy stable schemes to solve conservation laws21 Mar 2024
- 2023Variational Bayes image restoration with compressive autoencoders29 Nov 2023
- 2023InVAErt networks: a data-driven framework for model synthesis and identifiability analysis24 Jul 2023
- 2023Goal-oriented Uncertainty Quantification for Inverse Problems via Variational Encoder-Decoder Networks17 Apr 2023
- 2023An autoencoder compression approach for accelerating large-scale inverse problems10 Apr 2023
- 2023Dimension-reduced KRnet maps for high-dimensional Bayesian inverse problems1 Mar 2023
- 2023Quantifying uncertainty for deep learning based forecasting and flow-reconstruction using neural architecture search ensembles20 Feb 2023
- 2022Phi-DVAE: Physics-Informed Dynamical Variational Autoencoders for Unstructured Data Assimilation30 Sep 2022
- 2022Utilizing variational autoencoders in the Bayesian inverse problem of photoacoustic tomography13 Apr 2022
- 2022The efficacy and generalizability of conditional GANs for posterior inference in physics-based inverse problems15 Feb 2022
- 2021Solution of Physics-based Bayesian Inverse Problems with Deep Generative Priors6 Jul 2021
- 2024Neural Methods for Amortized Inferencecited by 39
- 2021Solution of Physics-based Bayesian Inverse Problems with Deep Generative Priorscited by 29
- 2022The efficacy and generalizability of conditional GANs for posterior inference in physics-based inverse problemscited by 15
- 2023InVAErt networks: a data-driven framework for model synthesis and identifiability analysiscited by 6
- 2024Paired Autoencoders for Likelihood-free Estimation in Inverse Problemscited by 6
- 2022Utilizing variational autoencoders in the Bayesian inverse problem of photoacoustic tomographycited by 5
- 2022Phi-DVAE: Physics-Informed Dynamical Variational Autoencoders for Unstructured Data Assimilationcited by 5
- 2023Quantifying uncertainty for deep learning based forecasting and flow-reconstruction using neural architecture search ensemblescited by 5
- 2025Good Things Come in Pairs: Paired Autoencoders for Inverse Problemscited by 5
- 2023Variational Bayes image restoration with compressive autoencoderscited by 4
- 2024A Primer on Variational Inference for Physics-Informed Deep Generative Modellingcited by 3
- 2025Generative AI for Autonomous Driving: A Reviewcited by 3
12 most cited of 29 All 29 (JSON)
- 2026A Multi-stage Constrained Optimization Framework for Data-driven Problems26 Jul 2026
- 2026LLM-Based Test Oracles: Source-of-Authority Taxonomy -- A Systematic Literature Review6 Jul 2026
- 2026Deep Adaptive Dimension Reduction for Bayesian Inference in Inverse Problems28 May 2026
- 2026UOTIP: Unbalanced Optimal Transport Map for Unpaired Inverse Problems20 May 2026
- 2026Multiparameter Uncertainty Mapping in Quantitative Molecular MRI using a Physics-Structured Variational Autoencoder (PS-VAE)3 Feb 2026
- 2026Variational Sparse Paired Autoencoders (vsPAIR) for Inverse Problems and Uncertainty Quantification3 Feb 2026
- 2025Diffusion for Fusion: Designing Stellarators with Generative AI25 Nov 2025
- 2025Geometric Autoencoder Priors for Bayesian Inversion: Learn First Observe Later24 Sep 2025
- 2025An invertible generative model for forward and inverse problems4 Sep 2025
- 2025Optimal Linear Baseline Models for Scientific Machine Learning7 Aug 2025
- 2025Adversarial Disentanglement by Backpropagation with Physics-Informed Variational Autoencoder16 Jun 2025
- 2025Generative AI for Autonomous Driving: A Review21 May 2025
12 newest of 29 All 29 (JSON)